Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20664 | 62215;62216;62217 | chr2:178589735;178589734;178589733 | chr2:179454462;179454461;179454460 |
N2AB | 19023 | 57292;57293;57294 | chr2:178589735;178589734;178589733 | chr2:179454462;179454461;179454460 |
N2A | 18096 | 54511;54512;54513 | chr2:178589735;178589734;178589733 | chr2:179454462;179454461;179454460 |
N2B | 11599 | 35020;35021;35022 | chr2:178589735;178589734;178589733 | chr2:179454462;179454461;179454460 |
Novex-1 | 11724 | 35395;35396;35397 | chr2:178589735;178589734;178589733 | chr2:179454462;179454461;179454460 |
Novex-2 | 11791 | 35596;35597;35598 | chr2:178589735;178589734;178589733 | chr2:179454462;179454461;179454460 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs879206414 | None | 0.005 | N | 0.129 | 0.139 | None | gnomAD-4.0.0 | 2.02981E-06 | None | None | None | None | I | None | 3.48663E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/I | rs1214786970 | 0.32 | 0.996 | N | 0.701 | 0.418 | 0.490074841992 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/I | rs1214786970 | 0.32 | 0.996 | N | 0.701 | 0.418 | 0.490074841992 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/I | rs1214786970 | 0.32 | 0.996 | N | 0.701 | 0.418 | 0.490074841992 | gnomAD-4.0.0 | 3.84458E-06 | None | None | None | None | I | None | 0 | 3.39006E-05 | None | 0 | 0 | None | 0 | 0 | 2.39399E-06 | 0 | 0 |
N/K | rs376455983 | 0.53 | 0.919 | N | 0.52 | 0.183 | 0.173771789658 | gnomAD-2.1.1 | 2.86E-05 | None | None | None | None | I | None | 4.13E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 5.48E-05 | 0 |
N/K | rs376455983 | 0.53 | 0.919 | N | 0.52 | 0.183 | 0.173771789658 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.02968E-04 | 0 | 0 |
N/K | rs376455983 | 0.53 | 0.919 | N | 0.52 | 0.183 | 0.173771789658 | gnomAD-4.0.0 | 2.7372E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69874E-06 | 1.15947E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5518 | ambiguous | 0.4485 | ambiguous | -0.208 | Destabilizing | 0.968 | D | 0.521 | neutral | None | None | None | None | I |
N/C | 0.6296 | likely_pathogenic | 0.5483 | ambiguous | 0.293 | Stabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
N/D | 0.1627 | likely_benign | 0.136 | benign | 0.166 | Stabilizing | 0.005 | N | 0.129 | neutral | N | 0.354071115 | None | None | I |
N/E | 0.7198 | likely_pathogenic | 0.589 | pathogenic | 0.123 | Stabilizing | 0.757 | D | 0.523 | neutral | None | None | None | None | I |
N/F | 0.8517 | likely_pathogenic | 0.7746 | pathogenic | -0.651 | Destabilizing | 0.997 | D | 0.661 | prob.neutral | None | None | None | None | I |
N/G | 0.7008 | likely_pathogenic | 0.6367 | pathogenic | -0.359 | Destabilizing | 0.862 | D | 0.521 | neutral | None | None | None | None | I |
N/H | 0.237 | likely_benign | 0.2122 | benign | -0.396 | Destabilizing | 0.996 | D | 0.513 | neutral | N | 0.475898674 | None | None | I |
N/I | 0.6616 | likely_pathogenic | 0.458 | ambiguous | 0.095 | Stabilizing | 0.996 | D | 0.701 | prob.delet. | N | 0.468759271 | None | None | I |
N/K | 0.8556 | likely_pathogenic | 0.7127 | pathogenic | 0.106 | Stabilizing | 0.919 | D | 0.52 | neutral | N | 0.469452704 | None | None | I |
N/L | 0.5617 | ambiguous | 0.4283 | ambiguous | 0.095 | Stabilizing | 0.991 | D | 0.621 | neutral | None | None | None | None | I |
N/M | 0.7297 | likely_pathogenic | 0.624 | pathogenic | 0.277 | Stabilizing | 0.999 | D | 0.668 | prob.neutral | None | None | None | None | I |
N/P | 0.8633 | likely_pathogenic | 0.7717 | pathogenic | 0.02 | Stabilizing | 0.997 | D | 0.681 | prob.neutral | None | None | None | None | I |
N/Q | 0.693 | likely_pathogenic | 0.5954 | pathogenic | -0.307 | Destabilizing | 0.991 | D | 0.559 | neutral | None | None | None | None | I |
N/R | 0.8534 | likely_pathogenic | 0.7412 | pathogenic | 0.14 | Stabilizing | 0.991 | D | 0.561 | neutral | None | None | None | None | I |
N/S | 0.1215 | likely_benign | 0.1095 | benign | -0.083 | Destabilizing | 0.824 | D | 0.597 | neutral | N | 0.44084195 | None | None | I |
N/T | 0.3234 | likely_benign | 0.2479 | benign | 0.009 | Stabilizing | 0.958 | D | 0.486 | neutral | N | 0.428640657 | None | None | I |
N/V | 0.6511 | likely_pathogenic | 0.4933 | ambiguous | 0.02 | Stabilizing | 0.997 | D | 0.685 | prob.delet. | None | None | None | None | I |
N/W | 0.9329 | likely_pathogenic | 0.9136 | pathogenic | -0.699 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | I |
N/Y | 0.421 | ambiguous | 0.3222 | benign | -0.408 | Destabilizing | 0.996 | D | 0.661 | prob.neutral | N | 0.46073722 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.