Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20674 | 62245;62246;62247 | chr2:178589705;178589704;178589703 | chr2:179454432;179454431;179454430 |
N2AB | 19033 | 57322;57323;57324 | chr2:178589705;178589704;178589703 | chr2:179454432;179454431;179454430 |
N2A | 18106 | 54541;54542;54543 | chr2:178589705;178589704;178589703 | chr2:179454432;179454431;179454430 |
N2B | 11609 | 35050;35051;35052 | chr2:178589705;178589704;178589703 | chr2:179454432;179454431;179454430 |
Novex-1 | 11734 | 35425;35426;35427 | chr2:178589705;178589704;178589703 | chr2:179454432;179454431;179454430 |
Novex-2 | 11801 | 35626;35627;35628 | chr2:178589705;178589704;178589703 | chr2:179454432;179454431;179454430 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs1171410396 | 0.35 | 1.0 | N | 0.703 | 0.347 | 0.219573609325 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
N/K | rs1171410396 | 0.35 | 1.0 | N | 0.703 | 0.347 | 0.219573609325 | gnomAD-4.0.0 | 1.59179E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85945E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.71 | likely_pathogenic | 0.6952 | pathogenic | -0.453 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
N/C | 0.7643 | likely_pathogenic | 0.7285 | pathogenic | 0.333 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
N/D | 0.4785 | ambiguous | 0.4234 | ambiguous | -0.068 | Destabilizing | 0.999 | D | 0.593 | neutral | N | 0.495762232 | None | None | N |
N/E | 0.842 | likely_pathogenic | 0.8057 | pathogenic | -0.067 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/F | 0.8359 | likely_pathogenic | 0.8244 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
N/G | 0.718 | likely_pathogenic | 0.7097 | pathogenic | -0.692 | Destabilizing | 0.999 | D | 0.564 | neutral | None | None | None | None | N |
N/H | 0.3315 | likely_benign | 0.3351 | benign | -0.696 | Destabilizing | 1.0 | D | 0.627 | neutral | N | 0.478986697 | None | None | N |
N/I | 0.7515 | likely_pathogenic | 0.7045 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.827 | deleterious | N | 0.482265153 | None | None | N |
N/K | 0.8057 | likely_pathogenic | 0.7813 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | N | 0.48502795 | None | None | N |
N/L | 0.6808 | likely_pathogenic | 0.6497 | pathogenic | 0.107 | Stabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
N/M | 0.7047 | likely_pathogenic | 0.6882 | pathogenic | 0.445 | Stabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
N/P | 0.9836 | likely_pathogenic | 0.9723 | pathogenic | -0.051 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
N/Q | 0.7521 | likely_pathogenic | 0.7398 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
N/R | 0.8474 | likely_pathogenic | 0.8139 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
N/S | 0.3624 | ambiguous | 0.3627 | ambiguous | -0.372 | Destabilizing | 0.999 | D | 0.547 | neutral | N | 0.505403222 | None | None | N |
N/T | 0.602 | likely_pathogenic | 0.5714 | pathogenic | -0.222 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.51742837 | None | None | N |
N/V | 0.7574 | likely_pathogenic | 0.7187 | pathogenic | -0.051 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
N/W | 0.9624 | likely_pathogenic | 0.9552 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
N/Y | 0.3928 | ambiguous | 0.3655 | ambiguous | -0.266 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.505738232 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.