Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20675 | 62248;62249;62250 | chr2:178589702;178589701;178589700 | chr2:179454429;179454428;179454427 |
N2AB | 19034 | 57325;57326;57327 | chr2:178589702;178589701;178589700 | chr2:179454429;179454428;179454427 |
N2A | 18107 | 54544;54545;54546 | chr2:178589702;178589701;178589700 | chr2:179454429;179454428;179454427 |
N2B | 11610 | 35053;35054;35055 | chr2:178589702;178589701;178589700 | chr2:179454429;179454428;179454427 |
Novex-1 | 11735 | 35428;35429;35430 | chr2:178589702;178589701;178589700 | chr2:179454429;179454428;179454427 |
Novex-2 | 11802 | 35629;35630;35631 | chr2:178589702;178589701;178589700 | chr2:179454429;179454428;179454427 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | rs1432751152 | -2.95 | 1.0 | N | 0.777 | 0.511 | 0.864692451478 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
L/H | rs1432751152 | -2.95 | 1.0 | N | 0.777 | 0.511 | 0.864692451478 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
L/I | None | None | 0.961 | N | 0.697 | 0.29 | 0.587237122171 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9727 | likely_pathogenic | 0.9663 | pathogenic | -2.452 | Highly Destabilizing | 0.985 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/C | 0.9204 | likely_pathogenic | 0.894 | pathogenic | -1.755 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
L/D | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -3.157 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
L/E | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | -2.946 | Highly Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
L/F | 0.5524 | ambiguous | 0.4402 | ambiguous | -1.421 | Destabilizing | 0.031 | N | 0.291 | neutral | N | 0.48264658 | None | None | N |
L/G | 0.9946 | likely_pathogenic | 0.9936 | pathogenic | -2.981 | Highly Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
L/H | 0.9912 | likely_pathogenic | 0.9826 | pathogenic | -2.632 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.501542086 | None | None | N |
L/I | 0.3116 | likely_benign | 0.2946 | benign | -0.92 | Destabilizing | 0.961 | D | 0.697 | prob.neutral | N | 0.511486619 | None | None | N |
L/K | 0.9938 | likely_pathogenic | 0.9894 | pathogenic | -1.963 | Destabilizing | 0.999 | D | 0.77 | deleterious | None | None | None | None | N |
L/M | 0.491 | ambiguous | 0.4247 | ambiguous | -0.862 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/N | 0.9965 | likely_pathogenic | 0.9942 | pathogenic | -2.276 | Highly Destabilizing | 0.999 | D | 0.8 | deleterious | None | None | None | None | N |
L/P | 0.9895 | likely_pathogenic | 0.9803 | pathogenic | -1.413 | Destabilizing | 0.998 | D | 0.805 | deleterious | N | 0.404089795 | None | None | N |
L/Q | 0.9901 | likely_pathogenic | 0.9843 | pathogenic | -2.148 | Highly Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
L/R | 0.9869 | likely_pathogenic | 0.98 | pathogenic | -1.694 | Destabilizing | 0.998 | D | 0.752 | deleterious | N | 0.501542086 | None | None | N |
L/S | 0.9959 | likely_pathogenic | 0.9941 | pathogenic | -2.87 | Highly Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | N |
L/T | 0.9666 | likely_pathogenic | 0.9501 | pathogenic | -2.526 | Highly Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
L/V | 0.3817 | ambiguous | 0.3666 | ambiguous | -1.413 | Destabilizing | 0.961 | D | 0.722 | prob.delet. | N | 0.465826114 | None | None | N |
L/W | 0.9628 | likely_pathogenic | 0.9378 | pathogenic | -1.945 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
L/Y | 0.9627 | likely_pathogenic | 0.9406 | pathogenic | -1.642 | Destabilizing | 0.942 | D | 0.75 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.