Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20687 | 62284;62285;62286 | chr2:178589666;178589665;178589664 | chr2:179454393;179454392;179454391 |
N2AB | 19046 | 57361;57362;57363 | chr2:178589666;178589665;178589664 | chr2:179454393;179454392;179454391 |
N2A | 18119 | 54580;54581;54582 | chr2:178589666;178589665;178589664 | chr2:179454393;179454392;179454391 |
N2B | 11622 | 35089;35090;35091 | chr2:178589666;178589665;178589664 | chr2:179454393;179454392;179454391 |
Novex-1 | 11747 | 35464;35465;35466 | chr2:178589666;178589665;178589664 | chr2:179454393;179454392;179454391 |
Novex-2 | 11814 | 35665;35666;35667 | chr2:178589666;178589665;178589664 | chr2:179454393;179454392;179454391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | rs76587526 | -2.034 | 0.999 | D | 0.564 | 0.285 | None | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.68E-05 | 0 |
L/V | rs76587526 | -2.034 | 0.999 | D | 0.564 | 0.285 | None | gnomAD-4.0.0 | 2.25825E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.7887E-05 | 0 | 3.31356E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9909 | likely_pathogenic | 0.9875 | pathogenic | -2.82 | Highly Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/C | 0.9703 | likely_pathogenic | 0.9655 | pathogenic | -1.719 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
L/D | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -3.034 | Highly Destabilizing | 1.0 | D | 0.927 | deleterious | None | None | None | None | N |
L/E | 0.9994 | likely_pathogenic | 0.9991 | pathogenic | -2.781 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
L/F | 0.8866 | likely_pathogenic | 0.8712 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
L/G | 0.9984 | likely_pathogenic | 0.9977 | pathogenic | -3.272 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
L/H | 0.9987 | likely_pathogenic | 0.9981 | pathogenic | -2.756 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/I | 0.3113 | likely_benign | 0.3034 | benign | -1.423 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.49893861 | None | None | N |
L/K | 0.9986 | likely_pathogenic | 0.9976 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/M | 0.5797 | likely_pathogenic | 0.56 | ambiguous | -1.597 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/N | 0.9996 | likely_pathogenic | 0.9993 | pathogenic | -2.889 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
L/P | 0.9994 | likely_pathogenic | 0.9991 | pathogenic | -1.888 | Destabilizing | 1.0 | D | 0.931 | deleterious | D | 0.533293597 | None | None | N |
L/Q | 0.9975 | likely_pathogenic | 0.9963 | pathogenic | -2.552 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | D | 0.533293597 | None | None | N |
L/R | 0.9968 | likely_pathogenic | 0.9956 | pathogenic | -2.312 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.533293597 | None | None | N |
L/S | 0.9993 | likely_pathogenic | 0.999 | pathogenic | -3.197 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
L/T | 0.9943 | likely_pathogenic | 0.9922 | pathogenic | -2.82 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/V | 0.4072 | ambiguous | 0.396 | ambiguous | -1.888 | Destabilizing | 0.999 | D | 0.564 | neutral | D | 0.522831403 | None | None | N |
L/W | 0.995 | likely_pathogenic | 0.9942 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
L/Y | 0.9957 | likely_pathogenic | 0.9947 | pathogenic | -1.783 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.