Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20691 | 62296;62297;62298 | chr2:178589654;178589653;178589652 | chr2:179454381;179454380;179454379 |
N2AB | 19050 | 57373;57374;57375 | chr2:178589654;178589653;178589652 | chr2:179454381;179454380;179454379 |
N2A | 18123 | 54592;54593;54594 | chr2:178589654;178589653;178589652 | chr2:179454381;179454380;179454379 |
N2B | 11626 | 35101;35102;35103 | chr2:178589654;178589653;178589652 | chr2:179454381;179454380;179454379 |
Novex-1 | 11751 | 35476;35477;35478 | chr2:178589654;178589653;178589652 | chr2:179454381;179454380;179454379 |
Novex-2 | 11818 | 35677;35678;35679 | chr2:178589654;178589653;178589652 | chr2:179454381;179454380;179454379 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.92 | N | 0.499 | 0.253 | 0.231873229951 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7673 | likely_pathogenic | 0.775 | pathogenic | 0.123 | Stabilizing | 0.863 | D | 0.471 | neutral | None | None | None | None | N |
R/C | 0.5431 | ambiguous | 0.5007 | ambiguous | -0.081 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
R/D | 0.9473 | likely_pathogenic | 0.9503 | pathogenic | -0.164 | Destabilizing | 0.969 | D | 0.565 | neutral | None | None | None | None | N |
R/E | 0.7591 | likely_pathogenic | 0.7756 | pathogenic | -0.062 | Destabilizing | 0.863 | D | 0.534 | neutral | None | None | None | None | N |
R/F | 0.8933 | likely_pathogenic | 0.8925 | pathogenic | 0.042 | Stabilizing | 0.997 | D | 0.607 | neutral | None | None | None | None | N |
R/G | 0.7612 | likely_pathogenic | 0.7636 | pathogenic | -0.112 | Destabilizing | 0.959 | D | 0.515 | neutral | N | 0.482520789 | None | None | N |
R/H | 0.2943 | likely_benign | 0.3049 | benign | -0.776 | Destabilizing | 0.997 | D | 0.535 | neutral | None | None | None | None | N |
R/I | 0.655 | likely_pathogenic | 0.6039 | pathogenic | 0.719 | Stabilizing | 0.997 | D | 0.601 | neutral | None | None | None | None | N |
R/K | 0.1334 | likely_benign | 0.1419 | benign | 0.059 | Stabilizing | 0.021 | N | 0.216 | neutral | N | 0.397614035 | None | None | N |
R/L | 0.5385 | ambiguous | 0.542 | ambiguous | 0.719 | Stabilizing | 0.969 | D | 0.515 | neutral | None | None | None | None | N |
R/M | 0.6693 | likely_pathogenic | 0.6298 | pathogenic | 0.055 | Stabilizing | 0.996 | D | 0.582 | neutral | N | 0.509784748 | None | None | N |
R/N | 0.8909 | likely_pathogenic | 0.8916 | pathogenic | 0.14 | Stabilizing | 0.969 | D | 0.534 | neutral | None | None | None | None | N |
R/P | 0.6631 | likely_pathogenic | 0.6908 | pathogenic | 0.542 | Stabilizing | 0.997 | D | 0.587 | neutral | None | None | None | None | N |
R/Q | 0.2509 | likely_benign | 0.2768 | benign | 0.153 | Stabilizing | 0.939 | D | 0.575 | neutral | None | None | None | None | N |
R/S | 0.8663 | likely_pathogenic | 0.8683 | pathogenic | -0.1 | Destabilizing | 0.92 | D | 0.499 | neutral | N | 0.508397881 | None | None | N |
R/T | 0.7305 | likely_pathogenic | 0.7112 | pathogenic | 0.155 | Stabilizing | 0.959 | D | 0.505 | neutral | N | 0.489985479 | None | None | N |
R/V | 0.7109 | likely_pathogenic | 0.6976 | pathogenic | 0.542 | Stabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
R/W | 0.6183 | likely_pathogenic | 0.6207 | pathogenic | -0.042 | Destabilizing | 0.999 | D | 0.67 | neutral | N | 0.474838278 | None | None | N |
R/Y | 0.7996 | likely_pathogenic | 0.8 | pathogenic | 0.365 | Stabilizing | 0.997 | D | 0.589 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.