Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20702 | 62329;62330;62331 | chr2:178589621;178589620;178589619 | chr2:179454348;179454347;179454346 |
N2AB | 19061 | 57406;57407;57408 | chr2:178589621;178589620;178589619 | chr2:179454348;179454347;179454346 |
N2A | 18134 | 54625;54626;54627 | chr2:178589621;178589620;178589619 | chr2:179454348;179454347;179454346 |
N2B | 11637 | 35134;35135;35136 | chr2:178589621;178589620;178589619 | chr2:179454348;179454347;179454346 |
Novex-1 | 11762 | 35509;35510;35511 | chr2:178589621;178589620;178589619 | chr2:179454348;179454347;179454346 |
Novex-2 | 11829 | 35710;35711;35712 | chr2:178589621;178589620;178589619 | chr2:179454348;179454347;179454346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.103 | N | 0.366 | 0.071 | 0.210429274316 | gnomAD-4.0.0 | 6.84416E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99682E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1003 | likely_benign | 0.1271 | benign | -0.708 | Destabilizing | 0.64 | D | 0.515 | neutral | N | 0.437327217 | None | None | N |
S/C | 0.1176 | likely_benign | 0.1355 | benign | -0.652 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/D | 0.886 | likely_pathogenic | 0.8126 | pathogenic | -1.528 | Destabilizing | 0.919 | D | 0.606 | neutral | None | None | None | None | N |
S/E | 0.9046 | likely_pathogenic | 0.8552 | pathogenic | -1.407 | Destabilizing | 0.919 | D | 0.602 | neutral | None | None | None | None | N |
S/F | 0.5052 | ambiguous | 0.4428 | ambiguous | -0.514 | Destabilizing | 0.988 | D | 0.743 | deleterious | None | None | None | None | N |
S/G | 0.1583 | likely_benign | 0.155 | benign | -1.052 | Destabilizing | 0.034 | N | 0.185 | neutral | None | None | None | None | N |
S/H | 0.7042 | likely_pathogenic | 0.6099 | pathogenic | -1.46 | Destabilizing | 0.076 | N | 0.568 | neutral | None | None | None | None | N |
S/I | 0.6241 | likely_pathogenic | 0.5843 | pathogenic | 0.137 | Stabilizing | 0.976 | D | 0.752 | deleterious | None | None | None | None | N |
S/K | 0.9741 | likely_pathogenic | 0.968 | pathogenic | -0.745 | Destabilizing | 0.919 | D | 0.614 | neutral | None | None | None | None | N |
S/L | 0.2862 | likely_benign | 0.2559 | benign | 0.137 | Stabilizing | 0.811 | D | 0.73 | prob.delet. | N | 0.518558947 | None | None | N |
S/M | 0.3736 | ambiguous | 0.3565 | ambiguous | 0.226 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
S/N | 0.4254 | ambiguous | 0.3611 | ambiguous | -1.215 | Destabilizing | 0.919 | D | 0.591 | neutral | None | None | None | None | N |
S/P | 0.9805 | likely_pathogenic | 0.9802 | pathogenic | -0.11 | Destabilizing | 0.984 | D | 0.717 | prob.delet. | N | 0.518905663 | None | None | N |
S/Q | 0.8136 | likely_pathogenic | 0.7798 | pathogenic | -1.131 | Destabilizing | 0.988 | D | 0.634 | neutral | None | None | None | None | N |
S/R | 0.9475 | likely_pathogenic | 0.9345 | pathogenic | -0.879 | Destabilizing | 0.976 | D | 0.716 | prob.delet. | None | None | None | None | N |
S/T | 0.1363 | likely_benign | 0.1354 | benign | -0.919 | Destabilizing | 0.103 | N | 0.366 | neutral | N | 0.469650279 | None | None | N |
S/V | 0.507 | ambiguous | 0.5076 | ambiguous | -0.11 | Destabilizing | 0.851 | D | 0.734 | prob.delet. | None | None | None | None | N |
S/W | 0.7158 | likely_pathogenic | 0.6581 | pathogenic | -0.738 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
S/Y | 0.4643 | ambiguous | 0.4027 | ambiguous | -0.362 | Destabilizing | 0.976 | D | 0.755 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.