Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20704 | 62335;62336;62337 | chr2:178589615;178589614;178589613 | chr2:179454342;179454341;179454340 |
N2AB | 19063 | 57412;57413;57414 | chr2:178589615;178589614;178589613 | chr2:179454342;179454341;179454340 |
N2A | 18136 | 54631;54632;54633 | chr2:178589615;178589614;178589613 | chr2:179454342;179454341;179454340 |
N2B | 11639 | 35140;35141;35142 | chr2:178589615;178589614;178589613 | chr2:179454342;179454341;179454340 |
Novex-1 | 11764 | 35515;35516;35517 | chr2:178589615;178589614;178589613 | chr2:179454342;179454341;179454340 |
Novex-2 | 11831 | 35716;35717;35718 | chr2:178589615;178589614;178589613 | chr2:179454342;179454341;179454340 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs1553641034 | None | 0.852 | N | 0.703 | 0.314 | 0.36256342048 | gnomAD-4.0.0 | 4.79085E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 3.47464E-04 | 2.69898E-06 | 0 | 3.31378E-05 |
H/R | rs770845631 | -2.203 | 0.959 | N | 0.689 | 0.264 | 0.305086939656 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/R | rs770845631 | -2.203 | 0.959 | N | 0.689 | 0.264 | 0.305086939656 | gnomAD-4.0.0 | 1.59231E-06 | None | None | None | None | N | None | 0 | 2.2877E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7089 | likely_pathogenic | 0.7313 | pathogenic | -2.008 | Highly Destabilizing | 0.969 | D | 0.695 | prob.neutral | None | None | None | None | N |
H/C | 0.3949 | ambiguous | 0.4434 | ambiguous | -1.186 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
H/D | 0.7617 | likely_pathogenic | 0.786 | pathogenic | -1.963 | Destabilizing | 0.852 | D | 0.703 | prob.neutral | N | 0.481576639 | None | None | N |
H/E | 0.7865 | likely_pathogenic | 0.8076 | pathogenic | -1.777 | Destabilizing | 0.939 | D | 0.644 | neutral | None | None | None | None | N |
H/F | 0.3973 | ambiguous | 0.4374 | ambiguous | 0.012 | Stabilizing | 0.884 | D | 0.719 | prob.delet. | None | None | None | None | N |
H/G | 0.8636 | likely_pathogenic | 0.8737 | pathogenic | -2.374 | Highly Destabilizing | 0.863 | D | 0.69 | prob.neutral | None | None | None | None | N |
H/I | 0.4447 | ambiguous | 0.4779 | ambiguous | -0.91 | Destabilizing | 0.991 | D | 0.726 | prob.delet. | None | None | None | None | N |
H/K | 0.7511 | likely_pathogenic | 0.7267 | pathogenic | -1.555 | Destabilizing | 0.939 | D | 0.705 | prob.neutral | None | None | None | None | N |
H/L | 0.2905 | likely_benign | 0.3156 | benign | -0.91 | Destabilizing | 0.92 | D | 0.724 | prob.delet. | N | 0.425549998 | None | None | N |
H/M | 0.6549 | likely_pathogenic | 0.6786 | pathogenic | -1.106 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
H/N | 0.3247 | likely_benign | 0.3688 | ambiguous | -2.062 | Highly Destabilizing | 0.061 | N | 0.275 | neutral | N | 0.433284047 | None | None | N |
H/P | 0.954 | likely_pathogenic | 0.9568 | pathogenic | -1.27 | Destabilizing | 0.996 | D | 0.693 | prob.neutral | N | 0.512419621 | None | None | N |
H/Q | 0.5619 | ambiguous | 0.6039 | pathogenic | -1.632 | Destabilizing | 0.959 | D | 0.706 | prob.neutral | N | 0.451869808 | None | None | N |
H/R | 0.4842 | ambiguous | 0.4988 | ambiguous | -1.834 | Destabilizing | 0.959 | D | 0.689 | prob.neutral | N | 0.457390271 | None | None | N |
H/S | 0.6268 | likely_pathogenic | 0.6621 | pathogenic | -2.159 | Highly Destabilizing | 0.863 | D | 0.673 | neutral | None | None | None | None | N |
H/T | 0.6103 | likely_pathogenic | 0.6586 | pathogenic | -1.877 | Destabilizing | 0.939 | D | 0.697 | prob.neutral | None | None | None | None | N |
H/V | 0.4172 | ambiguous | 0.4486 | ambiguous | -1.27 | Destabilizing | 0.939 | D | 0.732 | prob.delet. | None | None | None | None | N |
H/W | 0.5533 | ambiguous | 0.5475 | ambiguous | 0.491 | Stabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | N |
H/Y | 0.1942 | likely_benign | 0.2393 | benign | 0.213 | Stabilizing | 0.134 | N | 0.311 | neutral | N | 0.434497555 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.