Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20706 | 62341;62342;62343 | chr2:178589609;178589608;178589607 | chr2:179454336;179454335;179454334 |
N2AB | 19065 | 57418;57419;57420 | chr2:178589609;178589608;178589607 | chr2:179454336;179454335;179454334 |
N2A | 18138 | 54637;54638;54639 | chr2:178589609;178589608;178589607 | chr2:179454336;179454335;179454334 |
N2B | 11641 | 35146;35147;35148 | chr2:178589609;178589608;178589607 | chr2:179454336;179454335;179454334 |
Novex-1 | 11766 | 35521;35522;35523 | chr2:178589609;178589608;178589607 | chr2:179454336;179454335;179454334 |
Novex-2 | 11833 | 35722;35723;35724 | chr2:178589609;178589608;178589607 | chr2:179454336;179454335;179454334 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs773156172 | -2.529 | 0.999 | N | 0.685 | 0.363 | 0.402614778071 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
E/K | rs773156172 | -2.529 | 0.999 | N | 0.685 | 0.363 | 0.402614778071 | gnomAD-4.0.0 | 1.59244E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9107 | likely_pathogenic | 0.9173 | pathogenic | -1.47 | Destabilizing | 0.999 | D | 0.739 | prob.delet. | D | 0.523999709 | None | None | N |
E/C | 0.9878 | likely_pathogenic | 0.9907 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
E/D | 0.9451 | likely_pathogenic | 0.9418 | pathogenic | -1.916 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.486398848 | None | None | N |
E/F | 0.9951 | likely_pathogenic | 0.9954 | pathogenic | -1.272 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
E/G | 0.953 | likely_pathogenic | 0.9511 | pathogenic | -1.766 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.525774136 | None | None | N |
E/H | 0.989 | likely_pathogenic | 0.9913 | pathogenic | -1.075 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
E/I | 0.9789 | likely_pathogenic | 0.9822 | pathogenic | -0.61 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
E/K | 0.9735 | likely_pathogenic | 0.9776 | pathogenic | -1.366 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.504792591 | None | None | N |
E/L | 0.9857 | likely_pathogenic | 0.9871 | pathogenic | -0.61 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
E/M | 0.9763 | likely_pathogenic | 0.981 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
E/N | 0.9903 | likely_pathogenic | 0.9911 | pathogenic | -1.555 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
E/P | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
E/Q | 0.7822 | likely_pathogenic | 0.7958 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.763 | deleterious | N | 0.473014626 | None | None | N |
E/R | 0.9802 | likely_pathogenic | 0.9798 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
E/S | 0.9465 | likely_pathogenic | 0.9481 | pathogenic | -2.023 | Highly Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/T | 0.9728 | likely_pathogenic | 0.9759 | pathogenic | -1.725 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/V | 0.9414 | likely_pathogenic | 0.9539 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.779 | deleterious | N | 0.513403873 | None | None | N |
E/W | 0.9982 | likely_pathogenic | 0.998 | pathogenic | -1.456 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
E/Y | 0.9934 | likely_pathogenic | 0.9944 | pathogenic | -1.162 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.