Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2070962350;62351;62352 chr2:178589600;178589599;178589598chr2:179454327;179454326;179454325
N2AB1906857427;57428;57429 chr2:178589600;178589599;178589598chr2:179454327;179454326;179454325
N2A1814154646;54647;54648 chr2:178589600;178589599;178589598chr2:179454327;179454326;179454325
N2B1164435155;35156;35157 chr2:178589600;178589599;178589598chr2:179454327;179454326;179454325
Novex-11176935530;35531;35532 chr2:178589600;178589599;178589598chr2:179454327;179454326;179454325
Novex-21183635731;35732;35733 chr2:178589600;178589599;178589598chr2:179454327;179454326;179454325
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Fn3-38
  • Domain position: 42
  • Structural Position: 44
  • Q(SASA): 0.2712
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs371705537 -1.113 0.996 N 0.391 0.161 None gnomAD-2.1.1 4.04E-06 None None None None N None 6.46E-05 0 None 0 0 None 0 None 0 0 0
L/F rs371705537 -1.113 0.996 N 0.391 0.161 None gnomAD-3.1.2 3.95E-05 None None None None N None 1.4483E-04 0 0 0 0 None 0 0 0 0 0
L/F rs371705537 -1.113 0.996 N 0.391 0.161 None gnomAD-4.0.0 5.57906E-06 None None None None N None 1.06869E-04 0 None 0 0 None 0 0 0 0 1.60138E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2131 likely_benign 0.2548 benign -1.635 Destabilizing 0.079 N 0.123 neutral None None None None N
L/C 0.5415 ambiguous 0.6347 pathogenic -0.923 Destabilizing 0.999 D 0.391 neutral None None None None N
L/D 0.72 likely_pathogenic 0.8091 pathogenic -0.805 Destabilizing 0.046 N 0.309 neutral None None None None N
L/E 0.3283 likely_benign 0.3851 ambiguous -0.768 Destabilizing 0.884 D 0.409 neutral None None None None N
L/F 0.2063 likely_benign 0.2801 benign -1.031 Destabilizing 0.996 D 0.391 neutral N 0.488350683 None None N
L/G 0.4781 ambiguous 0.5729 pathogenic -1.989 Destabilizing 0.884 D 0.429 neutral None None None None N
L/H 0.2849 likely_benign 0.3738 ambiguous -1.107 Destabilizing 0.999 D 0.457 neutral N 0.458470493 None None N
L/I 0.1102 likely_benign 0.1303 benign -0.725 Destabilizing 0.92 D 0.309 neutral N 0.435921707 None None N
L/K 0.1717 likely_benign 0.1973 benign -1.016 Destabilizing 0.939 D 0.413 neutral None None None None N
L/M 0.1135 likely_benign 0.1503 benign -0.598 Destabilizing 0.997 D 0.42 neutral None None None None N
L/N 0.3785 ambiguous 0.4589 ambiguous -0.868 Destabilizing 0.982 D 0.461 neutral None None None None N
L/P 0.153 likely_benign 0.2053 benign -0.998 Destabilizing 0.988 D 0.465 neutral N 0.395707094 None None N
L/Q 0.1208 likely_benign 0.1444 benign -0.984 Destabilizing 0.991 D 0.476 neutral None None None None N
L/R 0.1836 likely_benign 0.232 benign -0.482 Destabilizing 0.988 D 0.454 neutral N 0.408292389 None None N
L/S 0.2901 likely_benign 0.3818 ambiguous -1.548 Destabilizing 0.884 D 0.394 neutral None None None None N
L/T 0.2331 likely_benign 0.2851 benign -1.385 Destabilizing 0.17 N 0.157 neutral None None None None N
L/V 0.105 likely_benign 0.1323 benign -0.998 Destabilizing 0.826 D 0.361 neutral N 0.458297135 None None N
L/W 0.3738 ambiguous 0.51 ambiguous -1.107 Destabilizing 0.999 D 0.497 neutral None None None None N
L/Y 0.4172 ambiguous 0.5369 ambiguous -0.879 Destabilizing 0.997 D 0.413 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.