Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20716 | 62371;62372;62373 | chr2:178589579;178589578;178589577 | chr2:179454306;179454305;179454304 |
N2AB | 19075 | 57448;57449;57450 | chr2:178589579;178589578;178589577 | chr2:179454306;179454305;179454304 |
N2A | 18148 | 54667;54668;54669 | chr2:178589579;178589578;178589577 | chr2:179454306;179454305;179454304 |
N2B | 11651 | 35176;35177;35178 | chr2:178589579;178589578;178589577 | chr2:179454306;179454305;179454304 |
Novex-1 | 11776 | 35551;35552;35553 | chr2:178589579;178589578;178589577 | chr2:179454306;179454305;179454304 |
Novex-2 | 11843 | 35752;35753;35754 | chr2:178589579;178589578;178589577 | chr2:179454306;179454305;179454304 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs794729243 | None | 0.989 | N | 0.583 | 0.425 | 0.417460480802 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/A | rs794729243 | None | 0.989 | N | 0.583 | 0.425 | 0.417460480802 | gnomAD-4.0.0 | 1.85953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69546E-06 | 0 | 1.60128E-05 |
E/K | None | None | 0.978 | N | 0.572 | 0.336 | 0.359357374593 | gnomAD-4.0.0 | 5.47496E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19673E-06 | 0 | 0 |
E/Q | rs548071435 | -0.373 | 0.889 | N | 0.276 | 0.158 | 0.304760801415 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
E/Q | rs548071435 | -0.373 | 0.889 | N | 0.276 | 0.158 | 0.304760801415 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs548071435 | -0.373 | 0.889 | N | 0.276 | 0.158 | 0.304760801415 | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 1E-03 | None | None | None | 0 | None |
E/Q | rs548071435 | -0.373 | 0.889 | N | 0.276 | 0.158 | 0.304760801415 | gnomAD-4.0.0 | 2.47921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39097E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3645 | ambiguous | 0.5242 | ambiguous | -0.718 | Destabilizing | 0.989 | D | 0.583 | neutral | N | 0.502317271 | None | None | N |
E/C | 0.8993 | likely_pathogenic | 0.9509 | pathogenic | -0.395 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/D | 0.2326 | likely_benign | 0.3495 | ambiguous | -0.793 | Destabilizing | 0.217 | N | 0.289 | neutral | N | 0.472240931 | None | None | N |
E/F | 0.8417 | likely_pathogenic | 0.9252 | pathogenic | -0.202 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
E/G | 0.4833 | ambiguous | 0.6031 | pathogenic | -1.021 | Destabilizing | 0.994 | D | 0.579 | neutral | N | 0.466925013 | None | None | N |
E/H | 0.6686 | likely_pathogenic | 0.797 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.3698 | ambiguous | 0.5681 | pathogenic | 0.087 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/K | 0.3872 | ambiguous | 0.5673 | pathogenic | -0.198 | Destabilizing | 0.978 | D | 0.572 | neutral | N | 0.478920336 | None | None | N |
E/L | 0.5259 | ambiguous | 0.7038 | pathogenic | 0.087 | Stabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
E/M | 0.5487 | ambiguous | 0.7367 | pathogenic | 0.274 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
E/N | 0.4834 | ambiguous | 0.67 | pathogenic | -0.702 | Destabilizing | 0.998 | D | 0.579 | neutral | None | None | None | None | N |
E/P | 0.9872 | likely_pathogenic | 0.9883 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
E/Q | 0.2007 | likely_benign | 0.2834 | benign | -0.62 | Destabilizing | 0.889 | D | 0.276 | neutral | N | 0.472994441 | None | None | N |
E/R | 0.5925 | likely_pathogenic | 0.7273 | pathogenic | 0.164 | Stabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
E/S | 0.4132 | ambiguous | 0.5597 | ambiguous | -0.925 | Destabilizing | 0.992 | D | 0.584 | neutral | None | None | None | None | N |
E/T | 0.3542 | ambiguous | 0.5276 | ambiguous | -0.677 | Destabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | N |
E/V | 0.2306 | likely_benign | 0.3502 | ambiguous | -0.16 | Destabilizing | 0.998 | D | 0.669 | neutral | N | 0.430859817 | None | None | N |
E/W | 0.9597 | likely_pathogenic | 0.9816 | pathogenic | 0.082 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/Y | 0.7944 | likely_pathogenic | 0.8957 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.