Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20719 | 62380;62381;62382 | chr2:178589570;178589569;178589568 | chr2:179454297;179454296;179454295 |
N2AB | 19078 | 57457;57458;57459 | chr2:178589570;178589569;178589568 | chr2:179454297;179454296;179454295 |
N2A | 18151 | 54676;54677;54678 | chr2:178589570;178589569;178589568 | chr2:179454297;179454296;179454295 |
N2B | 11654 | 35185;35186;35187 | chr2:178589570;178589569;178589568 | chr2:179454297;179454296;179454295 |
Novex-1 | 11779 | 35560;35561;35562 | chr2:178589570;178589569;178589568 | chr2:179454297;179454296;179454295 |
Novex-2 | 11846 | 35761;35762;35763 | chr2:178589570;178589569;178589568 | chr2:179454297;179454296;179454295 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs1477967306 | -1.023 | 0.998 | N | 0.537 | 0.373 | 0.368183359018 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 1.18203E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/P | rs1477967306 | -1.023 | 0.998 | N | 0.537 | 0.373 | 0.368183359018 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/P | rs1477967306 | -1.023 | 0.998 | N | 0.537 | 0.373 | 0.368183359018 | gnomAD-4.0.0 | 6.5786E-06 | None | None | None | None | N | None | 0 | 6.5548E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8392 | likely_pathogenic | 0.7907 | pathogenic | -1.378 | Destabilizing | 0.864 | D | 0.526 | neutral | None | None | None | None | N |
H/C | 0.4856 | ambiguous | 0.5355 | ambiguous | -0.516 | Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | N |
H/D | 0.7996 | likely_pathogenic | 0.7829 | pathogenic | -1.487 | Destabilizing | 0.921 | D | 0.511 | neutral | N | 0.475650744 | None | None | N |
H/E | 0.9022 | likely_pathogenic | 0.8761 | pathogenic | -1.315 | Destabilizing | 0.969 | D | 0.559 | neutral | None | None | None | None | N |
H/F | 0.7075 | likely_pathogenic | 0.6953 | pathogenic | 0.403 | Stabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
H/G | 0.8129 | likely_pathogenic | 0.7903 | pathogenic | -1.801 | Destabilizing | 0.927 | D | 0.531 | neutral | None | None | None | None | N |
H/I | 0.8907 | likely_pathogenic | 0.865 | pathogenic | -0.152 | Destabilizing | 0.995 | D | 0.583 | neutral | None | None | None | None | N |
H/K | 0.9236 | likely_pathogenic | 0.873 | pathogenic | -0.91 | Destabilizing | 0.969 | D | 0.515 | neutral | None | None | None | None | N |
H/L | 0.6204 | likely_pathogenic | 0.5783 | pathogenic | -0.152 | Destabilizing | 0.979 | D | 0.549 | neutral | N | 0.490081479 | None | None | N |
H/M | 0.8836 | likely_pathogenic | 0.865 | pathogenic | -0.349 | Destabilizing | 1.0 | D | 0.522 | neutral | None | None | None | None | N |
H/N | 0.3578 | ambiguous | 0.364 | ambiguous | -1.486 | Destabilizing | 0.116 | N | 0.188 | neutral | N | 0.397688606 | None | None | N |
H/P | 0.7771 | likely_pathogenic | 0.7431 | pathogenic | -0.547 | Destabilizing | 0.998 | D | 0.537 | neutral | N | 0.490428196 | None | None | N |
H/Q | 0.7847 | likely_pathogenic | 0.7385 | pathogenic | -1.142 | Destabilizing | 0.994 | D | 0.608 | neutral | N | 0.472214477 | None | None | N |
H/R | 0.8163 | likely_pathogenic | 0.7425 | pathogenic | -1.328 | Destabilizing | 0.979 | D | 0.603 | neutral | N | 0.5002584 | None | None | N |
H/S | 0.6058 | likely_pathogenic | 0.5468 | ambiguous | -1.48 | Destabilizing | 0.546 | D | 0.349 | neutral | None | None | None | None | N |
H/T | 0.7741 | likely_pathogenic | 0.759 | pathogenic | -1.189 | Destabilizing | 0.969 | D | 0.533 | neutral | None | None | None | None | N |
H/V | 0.8353 | likely_pathogenic | 0.7979 | pathogenic | -0.547 | Destabilizing | 0.995 | D | 0.557 | neutral | None | None | None | None | N |
H/W | 0.7713 | likely_pathogenic | 0.7772 | pathogenic | 0.924 | Stabilizing | 1.0 | D | 0.562 | neutral | None | None | None | None | N |
H/Y | 0.4005 | ambiguous | 0.4234 | ambiguous | 0.779 | Stabilizing | 0.998 | D | 0.583 | neutral | N | 0.482963506 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.