Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20732 | 62419;62420;62421 | chr2:178589531;178589530;178589529 | chr2:179454258;179454257;179454256 |
N2AB | 19091 | 57496;57497;57498 | chr2:178589531;178589530;178589529 | chr2:179454258;179454257;179454256 |
N2A | 18164 | 54715;54716;54717 | chr2:178589531;178589530;178589529 | chr2:179454258;179454257;179454256 |
N2B | 11667 | 35224;35225;35226 | chr2:178589531;178589530;178589529 | chr2:179454258;179454257;179454256 |
Novex-1 | 11792 | 35599;35600;35601 | chr2:178589531;178589530;178589529 | chr2:179454258;179454257;179454256 |
Novex-2 | 11859 | 35800;35801;35802 | chr2:178589531;178589530;178589529 | chr2:179454258;179454257;179454256 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.012 | N | 0.279 | 0.062 | 0.158396225186 | gnomAD-4.0.0 | 6.36819E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.14362E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3542 | ambiguous | 0.4155 | ambiguous | -0.047 | Destabilizing | 0.007 | N | 0.262 | neutral | None | None | None | None | N |
R/C | 0.2329 | likely_benign | 0.3362 | benign | -0.163 | Destabilizing | 0.864 | D | 0.355 | neutral | None | None | None | None | N |
R/D | 0.5051 | ambiguous | 0.5711 | pathogenic | -0.264 | Destabilizing | 0.031 | N | 0.31 | neutral | None | None | None | None | N |
R/E | 0.3299 | likely_benign | 0.4358 | ambiguous | -0.227 | Destabilizing | 0.007 | N | 0.225 | neutral | None | None | None | None | N |
R/F | 0.6393 | likely_pathogenic | 0.7686 | pathogenic | -0.353 | Destabilizing | 0.628 | D | 0.383 | neutral | None | None | None | None | N |
R/G | 0.1831 | likely_benign | 0.2197 | benign | -0.197 | Destabilizing | 0.024 | N | 0.275 | neutral | N | 0.396664312 | None | None | N |
R/H | 0.1021 | likely_benign | 0.1258 | benign | -0.67 | Destabilizing | 0.356 | N | 0.369 | neutral | None | None | None | None | N |
R/I | 0.451 | ambiguous | 0.5581 | ambiguous | 0.302 | Stabilizing | 0.106 | N | 0.431 | neutral | N | 0.467659028 | None | None | N |
R/K | 0.0562 | likely_benign | 0.0705 | benign | -0.141 | Destabilizing | None | N | 0.202 | neutral | N | 0.41146598 | None | None | N |
R/L | 0.3184 | likely_benign | 0.4295 | ambiguous | 0.302 | Stabilizing | 0.031 | N | 0.275 | neutral | None | None | None | None | N |
R/M | 0.3016 | likely_benign | 0.4193 | ambiguous | -0.006 | Destabilizing | 0.628 | D | 0.383 | neutral | None | None | None | None | N |
R/N | 0.3648 | ambiguous | 0.4267 | ambiguous | 0.084 | Stabilizing | 0.031 | N | 0.283 | neutral | None | None | None | None | N |
R/P | 0.8346 | likely_pathogenic | 0.8719 | pathogenic | 0.204 | Stabilizing | 0.136 | N | 0.385 | neutral | None | None | None | None | N |
R/Q | 0.105 | likely_benign | 0.132 | benign | -0.033 | Destabilizing | 0.016 | N | 0.3 | neutral | None | None | None | None | N |
R/S | 0.3654 | ambiguous | 0.4229 | ambiguous | -0.188 | Destabilizing | 0.012 | N | 0.279 | neutral | N | 0.439113941 | None | None | N |
R/T | 0.2488 | likely_benign | 0.3058 | benign | -0.042 | Destabilizing | 0.024 | N | 0.299 | neutral | N | 0.48477166 | None | None | N |
R/V | 0.4743 | ambiguous | 0.5737 | pathogenic | 0.204 | Stabilizing | 0.072 | N | 0.365 | neutral | None | None | None | None | N |
R/W | 0.3237 | likely_benign | 0.4878 | ambiguous | -0.468 | Destabilizing | 0.864 | D | 0.35 | neutral | None | None | None | None | N |
R/Y | 0.4568 | ambiguous | 0.6261 | pathogenic | -0.068 | Destabilizing | 0.356 | N | 0.4 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.