Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20734 | 62425;62426;62427 | chr2:178589525;178589524;178589523 | chr2:179454252;179454251;179454250 |
N2AB | 19093 | 57502;57503;57504 | chr2:178589525;178589524;178589523 | chr2:179454252;179454251;179454250 |
N2A | 18166 | 54721;54722;54723 | chr2:178589525;178589524;178589523 | chr2:179454252;179454251;179454250 |
N2B | 11669 | 35230;35231;35232 | chr2:178589525;178589524;178589523 | chr2:179454252;179454251;179454250 |
Novex-1 | 11794 | 35605;35606;35607 | chr2:178589525;178589524;178589523 | chr2:179454252;179454251;179454250 |
Novex-2 | 11861 | 35806;35807;35808 | chr2:178589525;178589524;178589523 | chr2:179454252;179454251;179454250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.022 | N | 0.093 | 0.167 | 0.330331372229 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1368 | likely_benign | 0.1816 | benign | -1.328 | Destabilizing | 0.625 | D | 0.219 | neutral | N | 0.481731355 | None | None | N |
V/C | 0.6704 | likely_pathogenic | 0.7598 | pathogenic | -0.91 | Destabilizing | 0.998 | D | 0.347 | neutral | None | None | None | None | N |
V/D | 0.3539 | ambiguous | 0.436 | ambiguous | -0.929 | Destabilizing | 0.966 | D | 0.413 | neutral | N | 0.452448598 | None | None | N |
V/E | 0.2301 | likely_benign | 0.2939 | benign | -0.952 | Destabilizing | 0.949 | D | 0.353 | neutral | None | None | None | None | N |
V/F | 0.1936 | likely_benign | 0.2476 | benign | -1.084 | Destabilizing | 0.934 | D | 0.356 | neutral | N | 0.478269762 | None | None | N |
V/G | 0.2294 | likely_benign | 0.2793 | benign | -1.622 | Destabilizing | 0.891 | D | 0.368 | neutral | N | 0.466431261 | None | None | N |
V/H | 0.4348 | ambiguous | 0.5326 | ambiguous | -1.053 | Destabilizing | 0.037 | N | 0.347 | neutral | None | None | None | None | N |
V/I | 0.0692 | likely_benign | 0.0814 | benign | -0.639 | Destabilizing | 0.022 | N | 0.093 | neutral | N | 0.374950606 | None | None | N |
V/K | 0.2514 | likely_benign | 0.292 | benign | -1.053 | Destabilizing | 0.949 | D | 0.355 | neutral | None | None | None | None | N |
V/L | 0.1386 | likely_benign | 0.1793 | benign | -0.639 | Destabilizing | 0.005 | N | 0.069 | neutral | N | 0.439095298 | None | None | N |
V/M | 0.1116 | likely_benign | 0.1651 | benign | -0.489 | Destabilizing | 0.325 | N | 0.193 | neutral | None | None | None | None | N |
V/N | 0.2045 | likely_benign | 0.2604 | benign | -0.794 | Destabilizing | 0.949 | D | 0.41 | neutral | None | None | None | None | N |
V/P | 0.6743 | likely_pathogenic | 0.6752 | pathogenic | -0.833 | Destabilizing | 0.991 | D | 0.385 | neutral | None | None | None | None | N |
V/Q | 0.2153 | likely_benign | 0.2572 | benign | -0.984 | Destabilizing | 0.949 | D | 0.389 | neutral | None | None | None | None | N |
V/R | 0.2597 | likely_benign | 0.2893 | benign | -0.493 | Destabilizing | 0.949 | D | 0.405 | neutral | None | None | None | None | N |
V/S | 0.1652 | likely_benign | 0.2074 | benign | -1.332 | Destabilizing | 0.842 | D | 0.341 | neutral | None | None | None | None | N |
V/T | 0.1194 | likely_benign | 0.1681 | benign | -1.24 | Destabilizing | 0.915 | D | 0.19 | neutral | None | None | None | None | N |
V/W | 0.7833 | likely_pathogenic | 0.8716 | pathogenic | -1.208 | Destabilizing | 0.998 | D | 0.442 | neutral | None | None | None | None | N |
V/Y | 0.5317 | ambiguous | 0.634 | pathogenic | -0.932 | Destabilizing | 0.949 | D | 0.363 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.