Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20735 | 62428;62429;62430 | chr2:178589522;178589521;178589520 | chr2:179454249;179454248;179454247 |
N2AB | 19094 | 57505;57506;57507 | chr2:178589522;178589521;178589520 | chr2:179454249;179454248;179454247 |
N2A | 18167 | 54724;54725;54726 | chr2:178589522;178589521;178589520 | chr2:179454249;179454248;179454247 |
N2B | 11670 | 35233;35234;35235 | chr2:178589522;178589521;178589520 | chr2:179454249;179454248;179454247 |
Novex-1 | 11795 | 35608;35609;35610 | chr2:178589522;178589521;178589520 | chr2:179454249;179454248;179454247 |
Novex-2 | 11862 | 35809;35810;35811 | chr2:178589522;178589521;178589520 | chr2:179454249;179454248;179454247 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs767027188 | -1.191 | 1.0 | N | 0.584 | 0.558 | 0.469660041277 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.62E-05 | None | 0 | None | 0 | 0 | 0 |
E/G | rs767027188 | -1.191 | 1.0 | N | 0.584 | 0.558 | 0.469660041277 | gnomAD-4.0.0 | 1.59219E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78334E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6723 | likely_pathogenic | 0.7593 | pathogenic | -0.771 | Destabilizing | 0.999 | D | 0.633 | neutral | N | 0.477494396 | None | None | N |
E/C | 0.9906 | likely_pathogenic | 0.9955 | pathogenic | -0.357 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
E/D | 0.7387 | likely_pathogenic | 0.7942 | pathogenic | -0.982 | Destabilizing | 0.999 | D | 0.571 | neutral | N | 0.490259961 | None | None | N |
E/F | 0.9948 | likely_pathogenic | 0.9967 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
E/G | 0.8082 | likely_pathogenic | 0.8628 | pathogenic | -1.085 | Destabilizing | 1.0 | D | 0.584 | neutral | N | 0.502034341 | None | None | N |
E/H | 0.9824 | likely_pathogenic | 0.9901 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
E/I | 0.9336 | likely_pathogenic | 0.9644 | pathogenic | 0.066 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
E/K | 0.8602 | likely_pathogenic | 0.8944 | pathogenic | -0.467 | Destabilizing | 0.999 | D | 0.666 | neutral | N | 0.482662638 | None | None | N |
E/L | 0.9606 | likely_pathogenic | 0.975 | pathogenic | 0.066 | Stabilizing | 1.0 | D | 0.61 | neutral | None | None | None | None | N |
E/M | 0.9518 | likely_pathogenic | 0.9722 | pathogenic | 0.445 | Stabilizing | 1.0 | D | 0.58 | neutral | None | None | None | None | N |
E/N | 0.9237 | likely_pathogenic | 0.9461 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
E/P | 0.886 | likely_pathogenic | 0.9248 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.588 | neutral | None | None | None | None | N |
E/Q | 0.645 | likely_pathogenic | 0.7141 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.643 | neutral | N | 0.468926476 | None | None | N |
E/R | 0.9214 | likely_pathogenic | 0.9416 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
E/S | 0.8465 | likely_pathogenic | 0.8863 | pathogenic | -1.083 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | N |
E/T | 0.8901 | likely_pathogenic | 0.9104 | pathogenic | -0.834 | Destabilizing | 1.0 | D | 0.62 | neutral | None | None | None | None | N |
E/V | 0.8523 | likely_pathogenic | 0.9189 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.583 | neutral | N | 0.490259961 | None | None | N |
E/W | 0.9982 | likely_pathogenic | 0.9989 | pathogenic | -0.291 | Destabilizing | 1.0 | D | 0.652 | neutral | None | None | None | None | N |
E/Y | 0.991 | likely_pathogenic | 0.9951 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.