Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20736 | 62431;62432;62433 | chr2:178589519;178589518;178589517 | chr2:179454246;179454245;179454244 |
N2AB | 19095 | 57508;57509;57510 | chr2:178589519;178589518;178589517 | chr2:179454246;179454245;179454244 |
N2A | 18168 | 54727;54728;54729 | chr2:178589519;178589518;178589517 | chr2:179454246;179454245;179454244 |
N2B | 11671 | 35236;35237;35238 | chr2:178589519;178589518;178589517 | chr2:179454246;179454245;179454244 |
Novex-1 | 11796 | 35611;35612;35613 | chr2:178589519;178589518;178589517 | chr2:179454246;179454245;179454244 |
Novex-2 | 11863 | 35812;35813;35814 | chr2:178589519;178589518;178589517 | chr2:179454246;179454245;179454244 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/Y | None | None | 1.0 | N | 0.805 | 0.49 | 0.617691798299 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7836 | likely_pathogenic | 0.7773 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
N/C | 0.8137 | likely_pathogenic | 0.8528 | pathogenic | 0.243 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
N/D | 0.3243 | likely_benign | 0.2908 | benign | 0.087 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | N | 0.48981212 | None | None | N |
N/E | 0.7443 | likely_pathogenic | 0.7378 | pathogenic | 0.084 | Stabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
N/F | 0.8997 | likely_pathogenic | 0.927 | pathogenic | -0.51 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
N/G | 0.4343 | ambiguous | 0.4298 | ambiguous | -0.603 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
N/H | 0.2856 | likely_benign | 0.3118 | benign | -0.518 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.502992061 | None | None | N |
N/I | 0.9219 | likely_pathogenic | 0.92 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.82 | deleterious | N | 0.492146066 | None | None | N |
N/K | 0.7173 | likely_pathogenic | 0.6941 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.807 | deleterious | N | 0.512862338 | None | None | N |
N/L | 0.7733 | likely_pathogenic | 0.762 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
N/M | 0.7845 | likely_pathogenic | 0.8011 | pathogenic | 0.396 | Stabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
N/P | 0.9827 | likely_pathogenic | 0.9882 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
N/Q | 0.6786 | likely_pathogenic | 0.6923 | pathogenic | -0.477 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
N/R | 0.8053 | likely_pathogenic | 0.8047 | pathogenic | 0.025 | Stabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
N/S | 0.2924 | likely_benign | 0.287 | benign | -0.32 | Destabilizing | 0.999 | D | 0.653 | neutral | N | 0.521327106 | None | None | N |
N/T | 0.6374 | likely_pathogenic | 0.6094 | pathogenic | -0.168 | Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.479864708 | None | None | N |
N/V | 0.9119 | likely_pathogenic | 0.9116 | pathogenic | -0.002 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
N/W | 0.9465 | likely_pathogenic | 0.9658 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
N/Y | 0.4471 | ambiguous | 0.511 | ambiguous | -0.189 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.467494444 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.