Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20742 | 62449;62450;62451 | chr2:178589501;178589500;178589499 | chr2:179454228;179454227;179454226 |
N2AB | 19101 | 57526;57527;57528 | chr2:178589501;178589500;178589499 | chr2:179454228;179454227;179454226 |
N2A | 18174 | 54745;54746;54747 | chr2:178589501;178589500;178589499 | chr2:179454228;179454227;179454226 |
N2B | 11677 | 35254;35255;35256 | chr2:178589501;178589500;178589499 | chr2:179454228;179454227;179454226 |
Novex-1 | 11802 | 35629;35630;35631 | chr2:178589501;178589500;178589499 | chr2:179454228;179454227;179454226 |
Novex-2 | 11869 | 35830;35831;35832 | chr2:178589501;178589500;178589499 | chr2:179454228;179454227;179454226 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.978 | D | 0.552 | 0.521 | 0.478376075226 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.09898E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9795 | likely_pathogenic | 0.9756 | pathogenic | -2.202 | Highly Destabilizing | 0.923 | D | 0.575 | neutral | None | None | None | None | N |
R/C | 0.7394 | likely_pathogenic | 0.7321 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
R/D | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -1.62 | Destabilizing | 0.995 | D | 0.58 | neutral | None | None | None | None | N |
R/E | 0.9847 | likely_pathogenic | 0.9786 | pathogenic | -1.418 | Destabilizing | 0.983 | D | 0.538 | neutral | None | None | None | None | N |
R/F | 0.9942 | likely_pathogenic | 0.992 | pathogenic | -1.188 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
R/G | 0.9818 | likely_pathogenic | 0.9806 | pathogenic | -2.468 | Highly Destabilizing | 0.978 | D | 0.552 | neutral | D | 0.524359012 | None | None | N |
R/H | 0.7145 | likely_pathogenic | 0.6455 | pathogenic | -2.087 | Highly Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | N |
R/I | 0.9699 | likely_pathogenic | 0.9702 | pathogenic | -1.397 | Destabilizing | 0.997 | D | 0.718 | prob.delet. | D | 0.524359012 | None | None | N |
R/K | 0.5583 | ambiguous | 0.5706 | pathogenic | -1.438 | Destabilizing | 0.948 | D | 0.626 | neutral | N | 0.478120415 | None | None | N |
R/L | 0.9514 | likely_pathogenic | 0.9469 | pathogenic | -1.397 | Destabilizing | 0.983 | D | 0.557 | neutral | None | None | None | None | N |
R/M | 0.9743 | likely_pathogenic | 0.9716 | pathogenic | -1.875 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
R/N | 0.9963 | likely_pathogenic | 0.9944 | pathogenic | -1.762 | Destabilizing | 0.983 | D | 0.519 | neutral | None | None | None | None | N |
R/P | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.662 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
R/Q | 0.6643 | likely_pathogenic | 0.5909 | pathogenic | -1.479 | Destabilizing | 0.998 | D | 0.528 | neutral | None | None | None | None | N |
R/S | 0.9924 | likely_pathogenic | 0.9898 | pathogenic | -2.369 | Highly Destabilizing | 0.37 | N | 0.489 | neutral | N | 0.509707343 | None | None | N |
R/T | 0.9885 | likely_pathogenic | 0.9857 | pathogenic | -2.0 | Highly Destabilizing | 0.956 | D | 0.523 | neutral | N | 0.498946922 | None | None | N |
R/V | 0.9736 | likely_pathogenic | 0.9721 | pathogenic | -1.662 | Destabilizing | 0.995 | D | 0.684 | prob.neutral | None | None | None | None | N |
R/W | 0.9392 | likely_pathogenic | 0.9124 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
R/Y | 0.9819 | likely_pathogenic | 0.9767 | pathogenic | -0.869 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.