Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20743 | 62452;62453;62454 | chr2:178589498;178589497;178589496 | chr2:179454225;179454224;179454223 |
N2AB | 19102 | 57529;57530;57531 | chr2:178589498;178589497;178589496 | chr2:179454225;179454224;179454223 |
N2A | 18175 | 54748;54749;54750 | chr2:178589498;178589497;178589496 | chr2:179454225;179454224;179454223 |
N2B | 11678 | 35257;35258;35259 | chr2:178589498;178589497;178589496 | chr2:179454225;179454224;179454223 |
Novex-1 | 11803 | 35632;35633;35634 | chr2:178589498;178589497;178589496 | chr2:179454225;179454224;179454223 |
Novex-2 | 11870 | 35833;35834;35835 | chr2:178589498;178589497;178589496 | chr2:179454225;179454224;179454223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs762990827 | -3.047 | 0.999 | D | 0.657 | 0.7 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/A | rs762990827 | -3.047 | 0.999 | D | 0.657 | 0.7 | None | gnomAD-4.0.0 | 1.85975E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.5432E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9342 | likely_pathogenic | 0.9345 | pathogenic | -2.553 | Highly Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.544414819 | None | None | N |
V/C | 0.9626 | likely_pathogenic | 0.9598 | pathogenic | -1.796 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
V/D | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -3.187 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/E | 0.9984 | likely_pathogenic | 0.9975 | pathogenic | -2.915 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.612767811 | None | None | N |
V/F | 0.967 | likely_pathogenic | 0.9748 | pathogenic | -1.479 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
V/G | 0.9638 | likely_pathogenic | 0.9572 | pathogenic | -3.032 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | D | 0.612767811 | None | None | N |
V/H | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -2.705 | Highly Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
V/I | 0.1758 | likely_benign | 0.1865 | benign | -1.125 | Destabilizing | 0.998 | D | 0.636 | neutral | None | None | None | None | N |
V/K | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -2.083 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/L | 0.8568 | likely_pathogenic | 0.8653 | pathogenic | -1.125 | Destabilizing | 0.997 | D | 0.673 | neutral | N | 0.51386094 | None | None | N |
V/M | 0.9231 | likely_pathogenic | 0.9363 | pathogenic | -1.418 | Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.529526568 | None | None | N |
V/N | 0.9983 | likely_pathogenic | 0.9974 | pathogenic | -2.706 | Highly Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
V/P | 0.9991 | likely_pathogenic | 0.9986 | pathogenic | -1.592 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/Q | 0.9978 | likely_pathogenic | 0.9967 | pathogenic | -2.4 | Highly Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/R | 0.9966 | likely_pathogenic | 0.9951 | pathogenic | -2.104 | Highly Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
V/S | 0.9889 | likely_pathogenic | 0.9857 | pathogenic | -3.073 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/T | 0.9642 | likely_pathogenic | 0.9577 | pathogenic | -2.68 | Highly Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/W | 0.9996 | likely_pathogenic | 0.9996 | pathogenic | -1.807 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/Y | 0.9976 | likely_pathogenic | 0.9977 | pathogenic | -1.703 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.