Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20745 | 62458;62459;62460 | chr2:178589492;178589491;178589490 | chr2:179454219;179454218;179454217 |
N2AB | 19104 | 57535;57536;57537 | chr2:178589492;178589491;178589490 | chr2:179454219;179454218;179454217 |
N2A | 18177 | 54754;54755;54756 | chr2:178589492;178589491;178589490 | chr2:179454219;179454218;179454217 |
N2B | 11680 | 35263;35264;35265 | chr2:178589492;178589491;178589490 | chr2:179454219;179454218;179454217 |
Novex-1 | 11805 | 35638;35639;35640 | chr2:178589492;178589491;178589490 | chr2:179454219;179454218;179454217 |
Novex-2 | 11872 | 35839;35840;35841 | chr2:178589492;178589491;178589490 | chr2:179454219;179454218;179454217 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs374085176 | -2.337 | 0.37 | N | 0.34 | 0.116 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 1.24008E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/A | rs374085176 | -2.337 | 0.37 | N | 0.34 | 0.116 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs374085176 | -2.337 | 0.37 | N | 0.34 | 0.116 | None | gnomAD-4.0.0 | 4.95877E-06 | None | None | None | None | N | None | 9.34554E-05 | 1.66845E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2519 | likely_benign | 0.2412 | benign | -1.718 | Destabilizing | 0.37 | N | 0.34 | neutral | N | 0.295202799 | None | None | N |
T/C | 0.6148 | likely_pathogenic | 0.5684 | pathogenic | -1.726 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
T/D | 0.9928 | likely_pathogenic | 0.9891 | pathogenic | -2.691 | Highly Destabilizing | 0.995 | D | 0.791 | deleterious | None | None | None | None | N |
T/E | 0.9894 | likely_pathogenic | 0.9841 | pathogenic | -2.493 | Highly Destabilizing | 0.995 | D | 0.784 | deleterious | None | None | None | None | N |
T/F | 0.991 | likely_pathogenic | 0.9848 | pathogenic | -1.243 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
T/G | 0.7479 | likely_pathogenic | 0.7096 | pathogenic | -1.977 | Destabilizing | 0.983 | D | 0.806 | deleterious | None | None | None | None | N |
T/H | 0.9854 | likely_pathogenic | 0.976 | pathogenic | -1.756 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
T/I | 0.9572 | likely_pathogenic | 0.9345 | pathogenic | -1.035 | Destabilizing | 0.997 | D | 0.806 | deleterious | N | 0.509915247 | None | None | N |
T/K | 0.9901 | likely_pathogenic | 0.985 | pathogenic | -1.174 | Destabilizing | 0.994 | D | 0.787 | deleterious | N | 0.509915247 | None | None | N |
T/L | 0.8195 | likely_pathogenic | 0.7425 | pathogenic | -1.035 | Destabilizing | 0.983 | D | 0.751 | deleterious | None | None | None | None | N |
T/M | 0.6727 | likely_pathogenic | 0.6096 | pathogenic | -1.324 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
T/N | 0.8868 | likely_pathogenic | 0.8373 | pathogenic | -1.892 | Destabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/P | 0.9246 | likely_pathogenic | 0.8788 | pathogenic | -1.244 | Destabilizing | 0.997 | D | 0.808 | deleterious | N | 0.47212765 | None | None | N |
T/Q | 0.971 | likely_pathogenic | 0.9553 | pathogenic | -1.617 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
T/R | 0.981 | likely_pathogenic | 0.9695 | pathogenic | -1.282 | Destabilizing | 0.997 | D | 0.803 | deleterious | N | 0.509915247 | None | None | N |
T/S | 0.465 | ambiguous | 0.442 | ambiguous | -1.942 | Destabilizing | 0.63 | D | 0.361 | neutral | N | 0.424680419 | None | None | N |
T/V | 0.7076 | likely_pathogenic | 0.6463 | pathogenic | -1.244 | Destabilizing | 0.983 | D | 0.631 | neutral | None | None | None | None | N |
T/W | 0.9981 | likely_pathogenic | 0.9967 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
T/Y | 0.9909 | likely_pathogenic | 0.9845 | pathogenic | -1.245 | Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.