Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20750 | 62473;62474;62475 | chr2:178589477;178589476;178589475 | chr2:179454204;179454203;179454202 |
N2AB | 19109 | 57550;57551;57552 | chr2:178589477;178589476;178589475 | chr2:179454204;179454203;179454202 |
N2A | 18182 | 54769;54770;54771 | chr2:178589477;178589476;178589475 | chr2:179454204;179454203;179454202 |
N2B | 11685 | 35278;35279;35280 | chr2:178589477;178589476;178589475 | chr2:179454204;179454203;179454202 |
Novex-1 | 11810 | 35653;35654;35655 | chr2:178589477;178589476;178589475 | chr2:179454204;179454203;179454202 |
Novex-2 | 11877 | 35854;35855;35856 | chr2:178589477;178589476;178589475 | chr2:179454204;179454203;179454202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs776757434 | -0.474 | 0.999 | D | 0.878 | 0.501 | 0.637830317834 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
G/R | rs776757434 | -0.474 | 0.999 | D | 0.878 | 0.501 | 0.637830317834 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.85 | likely_pathogenic | 0.8269 | pathogenic | -0.744 | Destabilizing | 0.619 | D | 0.411 | neutral | D | 0.546414784 | None | None | I |
G/C | 0.9269 | likely_pathogenic | 0.9167 | pathogenic | -1.057 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
G/D | 0.968 | likely_pathogenic | 0.9586 | pathogenic | -1.239 | Destabilizing | 0.999 | D | 0.868 | deleterious | None | None | None | None | I |
G/E | 0.9782 | likely_pathogenic | 0.9701 | pathogenic | -1.384 | Destabilizing | 0.999 | D | 0.879 | deleterious | D | 0.528475113 | None | None | I |
G/F | 0.9843 | likely_pathogenic | 0.984 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/H | 0.9882 | likely_pathogenic | 0.9852 | pathogenic | -0.926 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
G/I | 0.9869 | likely_pathogenic | 0.9826 | pathogenic | -0.745 | Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | I |
G/K | 0.9862 | likely_pathogenic | 0.9812 | pathogenic | -1.183 | Destabilizing | 0.998 | D | 0.878 | deleterious | None | None | None | None | I |
G/L | 0.9859 | likely_pathogenic | 0.9819 | pathogenic | -0.745 | Destabilizing | 0.996 | D | 0.855 | deleterious | None | None | None | None | I |
G/M | 0.9867 | likely_pathogenic | 0.9842 | pathogenic | -0.586 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
G/N | 0.9681 | likely_pathogenic | 0.9604 | pathogenic | -0.843 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | I |
G/P | 0.999 | likely_pathogenic | 0.9986 | pathogenic | -0.71 | Destabilizing | 0.999 | D | 0.88 | deleterious | None | None | None | None | I |
G/Q | 0.9743 | likely_pathogenic | 0.9658 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.879 | deleterious | None | None | None | None | I |
G/R | 0.963 | likely_pathogenic | 0.9528 | pathogenic | -0.631 | Destabilizing | 0.999 | D | 0.878 | deleterious | D | 0.546668273 | None | None | I |
G/S | 0.799 | likely_pathogenic | 0.7637 | pathogenic | -0.998 | Destabilizing | 0.996 | D | 0.723 | prob.delet. | None | None | None | None | I |
G/T | 0.9609 | likely_pathogenic | 0.9466 | pathogenic | -1.088 | Destabilizing | 0.998 | D | 0.867 | deleterious | None | None | None | None | I |
G/V | 0.977 | likely_pathogenic | 0.9697 | pathogenic | -0.71 | Destabilizing | 0.79 | D | 0.622 | neutral | D | 0.535565458 | None | None | I |
G/W | 0.9739 | likely_pathogenic | 0.9725 | pathogenic | -1.437 | Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.547682231 | None | None | I |
G/Y | 0.9789 | likely_pathogenic | 0.9777 | pathogenic | -1.127 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.