Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20758 | 62497;62498;62499 | chr2:178589453;178589452;178589451 | chr2:179454180;179454179;179454178 |
N2AB | 19117 | 57574;57575;57576 | chr2:178589453;178589452;178589451 | chr2:179454180;179454179;179454178 |
N2A | 18190 | 54793;54794;54795 | chr2:178589453;178589452;178589451 | chr2:179454180;179454179;179454178 |
N2B | 11693 | 35302;35303;35304 | chr2:178589453;178589452;178589451 | chr2:179454180;179454179;179454178 |
Novex-1 | 11818 | 35677;35678;35679 | chr2:178589453;178589452;178589451 | chr2:179454180;179454179;179454178 |
Novex-2 | 11885 | 35878;35879;35880 | chr2:178589453;178589452;178589451 | chr2:179454180;179454179;179454178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs794729470 | None | 0.039 | N | 0.253 | 0.124 | None | gnomAD-4.0.0 | 7.5279E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.89502E-06 | 0 | 0 |
E/V | None | None | 0.047 | N | 0.425 | 0.182 | 0.281381271821 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1245 | likely_benign | 0.1244 | benign | -0.054 | Destabilizing | None | N | 0.09 | neutral | N | 0.403670429 | None | None | I |
E/C | 0.7898 | likely_pathogenic | 0.8189 | pathogenic | -0.195 | Destabilizing | 0.914 | D | 0.353 | neutral | None | None | None | None | I |
E/D | 0.1068 | likely_benign | 0.1188 | benign | -0.17 | Destabilizing | None | N | 0.066 | neutral | N | 0.412868702 | None | None | I |
E/F | 0.8027 | likely_pathogenic | 0.8446 | pathogenic | -0.065 | Destabilizing | 0.482 | N | 0.491 | neutral | None | None | None | None | I |
E/G | 0.1428 | likely_benign | 0.1144 | benign | -0.182 | Destabilizing | None | N | 0.157 | neutral | N | 0.453368531 | None | None | I |
E/H | 0.4671 | ambiguous | 0.5081 | ambiguous | 0.521 | Stabilizing | 0.739 | D | 0.293 | neutral | None | None | None | None | I |
E/I | 0.4306 | ambiguous | 0.5099 | ambiguous | 0.227 | Stabilizing | 0.116 | N | 0.541 | neutral | None | None | None | None | I |
E/K | 0.141 | likely_benign | 0.1868 | benign | 0.359 | Stabilizing | 0.039 | N | 0.253 | neutral | N | 0.396821814 | None | None | I |
E/L | 0.4281 | ambiguous | 0.4807 | ambiguous | 0.227 | Stabilizing | 0.116 | N | 0.476 | neutral | None | None | None | None | I |
E/M | 0.4782 | ambiguous | 0.5468 | ambiguous | 0.002 | Stabilizing | 0.739 | D | 0.407 | neutral | None | None | None | None | I |
E/N | 0.205 | likely_benign | 0.2258 | benign | 0.182 | Stabilizing | 0.051 | N | 0.21 | neutral | None | None | None | None | I |
E/P | 0.3248 | likely_benign | 0.3092 | benign | 0.152 | Stabilizing | 0.209 | N | 0.448 | neutral | None | None | None | None | I |
E/Q | 0.1451 | likely_benign | 0.1587 | benign | 0.194 | Stabilizing | 0.167 | N | 0.351 | neutral | N | 0.471780933 | None | None | I |
E/R | 0.249 | likely_benign | 0.2956 | benign | 0.623 | Stabilizing | 0.116 | N | 0.273 | neutral | None | None | None | None | I |
E/S | 0.1514 | likely_benign | 0.1505 | benign | -0.003 | Destabilizing | None | N | 0.074 | neutral | None | None | None | None | I |
E/T | 0.1824 | likely_benign | 0.191 | benign | 0.106 | Stabilizing | 0.026 | N | 0.3 | neutral | None | None | None | None | I |
E/V | 0.2582 | likely_benign | 0.3094 | benign | 0.152 | Stabilizing | 0.047 | N | 0.425 | neutral | N | 0.415442074 | None | None | I |
E/W | 0.8957 | likely_pathogenic | 0.9155 | pathogenic | -0.006 | Destabilizing | 0.914 | D | 0.325 | neutral | None | None | None | None | I |
E/Y | 0.667 | likely_pathogenic | 0.7497 | pathogenic | 0.161 | Stabilizing | 0.739 | D | 0.484 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.