Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20760 | 62503;62504;62505 | chr2:178589447;178589446;178589445 | chr2:179454174;179454173;179454172 |
N2AB | 19119 | 57580;57581;57582 | chr2:178589447;178589446;178589445 | chr2:179454174;179454173;179454172 |
N2A | 18192 | 54799;54800;54801 | chr2:178589447;178589446;178589445 | chr2:179454174;179454173;179454172 |
N2B | 11695 | 35308;35309;35310 | chr2:178589447;178589446;178589445 | chr2:179454174;179454173;179454172 |
Novex-1 | 11820 | 35683;35684;35685 | chr2:178589447;178589446;178589445 | chr2:179454174;179454173;179454172 |
Novex-2 | 11887 | 35884;35885;35886 | chr2:178589447;178589446;178589445 | chr2:179454174;179454173;179454172 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.103 | N | 0.145 | 0.138 | 0.323342291347 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3727 | ambiguous | 0.3644 | ambiguous | -1.511 | Destabilizing | 0.893 | D | 0.461 | neutral | N | 0.475400028 | None | None | N |
V/C | 0.8521 | likely_pathogenic | 0.8645 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/D | 0.8818 | likely_pathogenic | 0.8552 | pathogenic | -1.442 | Destabilizing | 0.998 | D | 0.867 | deleterious | N | 0.468646533 | None | None | N |
V/E | 0.7555 | likely_pathogenic | 0.7274 | pathogenic | -1.254 | Destabilizing | 0.998 | D | 0.849 | deleterious | None | None | None | None | N |
V/F | 0.4364 | ambiguous | 0.4434 | ambiguous | -0.807 | Destabilizing | 0.993 | D | 0.746 | deleterious | N | 0.489097257 | None | None | N |
V/G | 0.6673 | likely_pathogenic | 0.6178 | pathogenic | -2.001 | Highly Destabilizing | 0.998 | D | 0.854 | deleterious | N | 0.468139554 | None | None | N |
V/H | 0.9124 | likely_pathogenic | 0.8976 | pathogenic | -1.526 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/I | 0.0935 | likely_benign | 0.1001 | benign | -0.179 | Destabilizing | 0.103 | N | 0.145 | neutral | N | 0.436169636 | None | None | N |
V/K | 0.8682 | likely_pathogenic | 0.845 | pathogenic | -1.184 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/L | 0.4569 | ambiguous | 0.5009 | ambiguous | -0.179 | Destabilizing | 0.807 | D | 0.383 | neutral | N | 0.484211513 | None | None | N |
V/M | 0.2755 | likely_benign | 0.2975 | benign | -0.249 | Destabilizing | 0.995 | D | 0.627 | neutral | None | None | None | None | N |
V/N | 0.7988 | likely_pathogenic | 0.7493 | pathogenic | -1.427 | Destabilizing | 0.998 | D | 0.891 | deleterious | None | None | None | None | N |
V/P | 0.9834 | likely_pathogenic | 0.9774 | pathogenic | -0.592 | Destabilizing | 0.998 | D | 0.848 | deleterious | None | None | None | None | N |
V/Q | 0.7953 | likely_pathogenic | 0.756 | pathogenic | -1.28 | Destabilizing | 0.998 | D | 0.846 | deleterious | None | None | None | None | N |
V/R | 0.8438 | likely_pathogenic | 0.8123 | pathogenic | -1.054 | Destabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
V/S | 0.6607 | likely_pathogenic | 0.6082 | pathogenic | -2.086 | Highly Destabilizing | 0.998 | D | 0.693 | prob.delet. | None | None | None | None | N |
V/T | 0.2791 | likely_benign | 0.2421 | benign | -1.742 | Destabilizing | 0.982 | D | 0.537 | neutral | None | None | None | None | N |
V/W | 0.9459 | likely_pathogenic | 0.952 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.752 | deleterious | None | None | None | None | N |
V/Y | 0.8369 | likely_pathogenic | 0.841 | pathogenic | -0.771 | Destabilizing | 0.998 | D | 0.728 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.