Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20764 | 62515;62516;62517 | chr2:178589435;178589434;178589433 | chr2:179454162;179454161;179454160 |
N2AB | 19123 | 57592;57593;57594 | chr2:178589435;178589434;178589433 | chr2:179454162;179454161;179454160 |
N2A | 18196 | 54811;54812;54813 | chr2:178589435;178589434;178589433 | chr2:179454162;179454161;179454160 |
N2B | 11699 | 35320;35321;35322 | chr2:178589435;178589434;178589433 | chr2:179454162;179454161;179454160 |
Novex-1 | 11824 | 35695;35696;35697 | chr2:178589435;178589434;178589433 | chr2:179454162;179454161;179454160 |
Novex-2 | 11891 | 35896;35897;35898 | chr2:178589435;178589434;178589433 | chr2:179454162;179454161;179454160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs397517651 | -0.259 | 0.999 | N | 0.649 | 0.298 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.65344E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs397517651 | -0.259 | 0.999 | N | 0.649 | 0.298 | None | gnomAD-3.1.2 | 6.58E-05 | None | None | None | None | N | None | 2.41371E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs397517651 | -0.259 | 0.999 | N | 0.649 | 0.298 | None | gnomAD-4.0.0 | 1.11574E-05 | None | None | None | None | N | None | 2.40359E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5825 | likely_pathogenic | 0.5672 | pathogenic | -0.695 | Destabilizing | 0.983 | D | 0.493 | neutral | N | 0.496834093 | None | None | N |
E/C | 0.9881 | likely_pathogenic | 0.9901 | pathogenic | -0.38 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
E/D | 0.2015 | likely_benign | 0.2046 | benign | -0.598 | Destabilizing | 0.991 | D | 0.511 | neutral | N | 0.434881557 | None | None | N |
E/F | 0.9878 | likely_pathogenic | 0.9887 | pathogenic | -0.275 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
E/G | 0.5773 | likely_pathogenic | 0.5709 | pathogenic | -0.971 | Destabilizing | 0.991 | D | 0.596 | neutral | N | 0.479545085 | None | None | N |
E/H | 0.9568 | likely_pathogenic | 0.9534 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.568 | neutral | None | None | None | None | N |
E/I | 0.9253 | likely_pathogenic | 0.9285 | pathogenic | 0.032 | Stabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
E/K | 0.8079 | likely_pathogenic | 0.7854 | pathogenic | -0.255 | Destabilizing | 0.991 | D | 0.503 | neutral | N | 0.478531127 | None | None | N |
E/L | 0.9107 | likely_pathogenic | 0.9016 | pathogenic | 0.032 | Stabilizing | 0.999 | D | 0.667 | prob.neutral | None | None | None | None | N |
E/M | 0.9236 | likely_pathogenic | 0.9154 | pathogenic | 0.225 | Stabilizing | 1.0 | D | 0.707 | prob.delet. | None | None | None | None | N |
E/N | 0.7338 | likely_pathogenic | 0.7006 | pathogenic | -0.629 | Destabilizing | 0.998 | D | 0.667 | prob.neutral | None | None | None | None | N |
E/P | 0.8927 | likely_pathogenic | 0.8595 | pathogenic | -0.19 | Destabilizing | 0.999 | D | 0.661 | prob.neutral | None | None | None | None | N |
E/Q | 0.6366 | likely_pathogenic | 0.5919 | pathogenic | -0.55 | Destabilizing | 0.999 | D | 0.649 | prob.neutral | N | 0.467517216 | None | None | N |
E/R | 0.8948 | likely_pathogenic | 0.8767 | pathogenic | 0.066 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
E/S | 0.7112 | likely_pathogenic | 0.697 | pathogenic | -0.862 | Destabilizing | 0.854 | D | 0.327 | neutral | None | None | None | None | N |
E/T | 0.7865 | likely_pathogenic | 0.7672 | pathogenic | -0.639 | Destabilizing | 0.987 | D | 0.659 | prob.neutral | None | None | None | None | N |
E/V | 0.7957 | likely_pathogenic | 0.7926 | pathogenic | -0.19 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.480559043 | None | None | N |
E/W | 0.9938 | likely_pathogenic | 0.9941 | pathogenic | -0.031 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
E/Y | 0.9701 | likely_pathogenic | 0.9708 | pathogenic | -0.036 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.