Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20765 | 62518;62519;62520 | chr2:178589432;178589431;178589430 | chr2:179454159;179454158;179454157 |
N2AB | 19124 | 57595;57596;57597 | chr2:178589432;178589431;178589430 | chr2:179454159;179454158;179454157 |
N2A | 18197 | 54814;54815;54816 | chr2:178589432;178589431;178589430 | chr2:179454159;179454158;179454157 |
N2B | 11700 | 35323;35324;35325 | chr2:178589432;178589431;178589430 | chr2:179454159;179454158;179454157 |
Novex-1 | 11825 | 35698;35699;35700 | chr2:178589432;178589431;178589430 | chr2:179454159;179454158;179454157 |
Novex-2 | 11892 | 35899;35900;35901 | chr2:178589432;178589431;178589430 | chr2:179454159;179454158;179454157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.799 | N | 0.529 | 0.257 | 0.365703291355 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3718 | ambiguous | 0.4704 | ambiguous | -0.157 | Destabilizing | 0.799 | D | 0.529 | neutral | N | 0.434818134 | None | None | N |
D/C | 0.8846 | likely_pathogenic | 0.9405 | pathogenic | -0.026 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
D/E | 0.1968 | likely_benign | 0.281 | benign | -0.255 | Destabilizing | 0.005 | N | 0.195 | neutral | N | 0.361048307 | None | None | N |
D/F | 0.7964 | likely_pathogenic | 0.8708 | pathogenic | -0.118 | Destabilizing | 0.974 | D | 0.661 | prob.neutral | None | None | None | None | N |
D/G | 0.4646 | ambiguous | 0.5658 | pathogenic | -0.329 | Destabilizing | 0.799 | D | 0.499 | neutral | N | 0.478704984 | None | None | N |
D/H | 0.6625 | likely_pathogenic | 0.751 | pathogenic | 0.18 | Stabilizing | 0.966 | D | 0.525 | neutral | N | 0.46046594 | None | None | N |
D/I | 0.532 | ambiguous | 0.6497 | pathogenic | 0.239 | Stabilizing | 0.903 | D | 0.577 | neutral | None | None | None | None | N |
D/K | 0.7256 | likely_pathogenic | 0.8033 | pathogenic | 0.374 | Stabilizing | 0.725 | D | 0.492 | neutral | None | None | None | None | N |
D/L | 0.5776 | likely_pathogenic | 0.6839 | pathogenic | 0.239 | Stabilizing | 0.725 | D | 0.596 | neutral | None | None | None | None | N |
D/M | 0.7583 | likely_pathogenic | 0.8413 | pathogenic | 0.225 | Stabilizing | 0.993 | D | 0.615 | neutral | None | None | None | None | N |
D/N | 0.2254 | likely_benign | 0.2932 | benign | 0.096 | Stabilizing | 0.799 | D | 0.557 | neutral | N | 0.477838193 | None | None | N |
D/P | 0.7976 | likely_pathogenic | 0.8249 | pathogenic | 0.128 | Stabilizing | 0.974 | D | 0.615 | neutral | None | None | None | None | N |
D/Q | 0.5955 | likely_pathogenic | 0.6865 | pathogenic | 0.12 | Stabilizing | 0.903 | D | 0.463 | neutral | None | None | None | None | N |
D/R | 0.7829 | likely_pathogenic | 0.8347 | pathogenic | 0.564 | Stabilizing | 0.949 | D | 0.63 | neutral | None | None | None | None | N |
D/S | 0.3348 | likely_benign | 0.4226 | ambiguous | -0.006 | Destabilizing | 0.841 | D | 0.464 | neutral | None | None | None | None | N |
D/T | 0.4509 | ambiguous | 0.5452 | ambiguous | 0.129 | Stabilizing | 0.841 | D | 0.625 | neutral | None | None | None | None | N |
D/V | 0.3514 | ambiguous | 0.4592 | ambiguous | 0.128 | Stabilizing | 0.051 | N | 0.389 | neutral | N | 0.412250706 | None | None | N |
D/W | 0.9599 | likely_pathogenic | 0.9721 | pathogenic | -0.011 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
D/Y | 0.503 | ambiguous | 0.612 | pathogenic | 0.117 | Stabilizing | 0.989 | D | 0.662 | prob.neutral | N | 0.479398418 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.