Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20789 | 62590;62591;62592 | chr2:178589360;178589359;178589358 | chr2:179454087;179454086;179454085 |
N2AB | 19148 | 57667;57668;57669 | chr2:178589360;178589359;178589358 | chr2:179454087;179454086;179454085 |
N2A | 18221 | 54886;54887;54888 | chr2:178589360;178589359;178589358 | chr2:179454087;179454086;179454085 |
N2B | 11724 | 35395;35396;35397 | chr2:178589360;178589359;178589358 | chr2:179454087;179454086;179454085 |
Novex-1 | 11849 | 35770;35771;35772 | chr2:178589360;178589359;178589358 | chr2:179454087;179454086;179454085 |
Novex-2 | 11916 | 35971;35972;35973 | chr2:178589360;178589359;178589358 | chr2:179454087;179454086;179454085 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs750434015 | -1.387 | 0.028 | D | 0.686 | 0.715 | None | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 1.24069E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs750434015 | -1.387 | 0.028 | D | 0.686 | 0.715 | None | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs750434015 | -1.387 | 0.028 | D | 0.686 | 0.715 | None | gnomAD-4.0.0 | 3.71921E-06 | None | None | None | None | N | None | 8.01368E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9135 | likely_pathogenic | 0.9304 | pathogenic | -2.38 | Highly Destabilizing | 0.842 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/C | 0.9271 | likely_pathogenic | 0.9403 | pathogenic | -1.606 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -2.75 | Highly Destabilizing | 0.974 | D | 0.871 | deleterious | None | None | None | None | N |
L/E | 0.9915 | likely_pathogenic | 0.994 | pathogenic | -2.482 | Highly Destabilizing | 0.974 | D | 0.853 | deleterious | None | None | None | None | N |
L/F | 0.448 | ambiguous | 0.4856 | ambiguous | -1.462 | Destabilizing | 0.934 | D | 0.697 | prob.neutral | D | 0.530384598 | None | None | N |
L/G | 0.9858 | likely_pathogenic | 0.9896 | pathogenic | -2.906 | Highly Destabilizing | 0.974 | D | 0.837 | deleterious | None | None | None | None | N |
L/H | 0.9882 | likely_pathogenic | 0.9913 | pathogenic | -2.283 | Highly Destabilizing | 0.997 | D | 0.864 | deleterious | D | 0.631471348 | None | None | N |
L/I | 0.1251 | likely_benign | 0.1276 | benign | -0.831 | Destabilizing | 0.005 | N | 0.249 | neutral | D | 0.562001666 | None | None | N |
L/K | 0.9889 | likely_pathogenic | 0.9917 | pathogenic | -1.844 | Destabilizing | 0.974 | D | 0.814 | deleterious | None | None | None | None | N |
L/M | 0.1893 | likely_benign | 0.2015 | benign | -0.831 | Destabilizing | 0.525 | D | 0.454 | neutral | None | None | None | None | N |
L/N | 0.9956 | likely_pathogenic | 0.9965 | pathogenic | -2.344 | Highly Destabilizing | 0.991 | D | 0.877 | deleterious | None | None | None | None | N |
L/P | 0.99 | likely_pathogenic | 0.9945 | pathogenic | -1.334 | Destabilizing | 0.028 | N | 0.686 | prob.neutral | D | 0.631471348 | None | None | N |
L/Q | 0.9778 | likely_pathogenic | 0.9826 | pathogenic | -2.111 | Highly Destabilizing | 0.974 | D | 0.859 | deleterious | None | None | None | None | N |
L/R | 0.983 | likely_pathogenic | 0.9872 | pathogenic | -1.792 | Destabilizing | 0.966 | D | 0.857 | deleterious | D | 0.631471348 | None | None | N |
L/S | 0.9912 | likely_pathogenic | 0.9932 | pathogenic | -2.973 | Highly Destabilizing | 0.974 | D | 0.81 | deleterious | None | None | None | None | N |
L/T | 0.9493 | likely_pathogenic | 0.9588 | pathogenic | -2.546 | Highly Destabilizing | 0.842 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/V | 0.2247 | likely_benign | 0.2366 | benign | -1.334 | Destabilizing | 0.454 | N | 0.513 | neutral | D | 0.532024514 | None | None | N |
L/W | 0.9118 | likely_pathogenic | 0.936 | pathogenic | -1.738 | Destabilizing | 0.998 | D | 0.843 | deleterious | None | None | None | None | N |
L/Y | 0.9503 | likely_pathogenic | 0.9611 | pathogenic | -1.465 | Destabilizing | 0.991 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.