Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20793 | 62602;62603;62604 | chr2:178589348;178589347;178589346 | chr2:179454075;179454074;179454073 |
N2AB | 19152 | 57679;57680;57681 | chr2:178589348;178589347;178589346 | chr2:179454075;179454074;179454073 |
N2A | 18225 | 54898;54899;54900 | chr2:178589348;178589347;178589346 | chr2:179454075;179454074;179454073 |
N2B | 11728 | 35407;35408;35409 | chr2:178589348;178589347;178589346 | chr2:179454075;179454074;179454073 |
Novex-1 | 11853 | 35782;35783;35784 | chr2:178589348;178589347;178589346 | chr2:179454075;179454074;179454073 |
Novex-2 | 11920 | 35983;35984;35985 | chr2:178589348;178589347;178589346 | chr2:179454075;179454074;179454073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.454 | N | 0.613 | 0.175 | 0.502752565406 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7492 | likely_pathogenic | 0.7536 | pathogenic | -1.672 | Destabilizing | 0.625 | D | 0.672 | neutral | N | 0.507286813 | None | None | N |
V/C | 0.8476 | likely_pathogenic | 0.8831 | pathogenic | -1.229 | Destabilizing | 0.998 | D | 0.769 | deleterious | None | None | None | None | N |
V/D | 0.9941 | likely_pathogenic | 0.9949 | pathogenic | -1.51 | Destabilizing | 0.989 | D | 0.83 | deleterious | D | 0.62058997 | None | None | N |
V/E | 0.9765 | likely_pathogenic | 0.9806 | pathogenic | -1.408 | Destabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
V/F | 0.4278 | ambiguous | 0.4464 | ambiguous | -1.082 | Destabilizing | 0.934 | D | 0.789 | deleterious | D | 0.540846771 | None | None | N |
V/G | 0.8446 | likely_pathogenic | 0.8413 | pathogenic | -2.107 | Highly Destabilizing | 0.966 | D | 0.789 | deleterious | D | 0.5671921 | None | None | N |
V/H | 0.982 | likely_pathogenic | 0.9867 | pathogenic | -1.738 | Destabilizing | 0.998 | D | 0.807 | deleterious | None | None | None | None | N |
V/I | 0.068 | likely_benign | 0.0778 | benign | -0.526 | Destabilizing | 0.454 | N | 0.613 | neutral | N | 0.495701595 | None | None | N |
V/K | 0.9727 | likely_pathogenic | 0.9771 | pathogenic | -1.242 | Destabilizing | 0.974 | D | 0.785 | deleterious | None | None | None | None | N |
V/L | 0.2175 | likely_benign | 0.2857 | benign | -0.526 | Destabilizing | 0.005 | N | 0.239 | neutral | D | 0.559107416 | None | None | N |
V/M | 0.313 | likely_benign | 0.3853 | ambiguous | -0.534 | Destabilizing | 0.949 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/N | 0.9651 | likely_pathogenic | 0.9752 | pathogenic | -1.204 | Destabilizing | 0.991 | D | 0.829 | deleterious | None | None | None | None | N |
V/P | 0.9716 | likely_pathogenic | 0.9768 | pathogenic | -0.875 | Destabilizing | 0.991 | D | 0.801 | deleterious | None | None | None | None | N |
V/Q | 0.9535 | likely_pathogenic | 0.9621 | pathogenic | -1.222 | Destabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
V/R | 0.959 | likely_pathogenic | 0.963 | pathogenic | -0.957 | Destabilizing | 0.974 | D | 0.833 | deleterious | None | None | None | None | N |
V/S | 0.8999 | likely_pathogenic | 0.9094 | pathogenic | -1.858 | Destabilizing | 0.974 | D | 0.79 | deleterious | None | None | None | None | N |
V/T | 0.7776 | likely_pathogenic | 0.8041 | pathogenic | -1.623 | Destabilizing | 0.915 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/W | 0.9632 | likely_pathogenic | 0.9715 | pathogenic | -1.397 | Destabilizing | 0.037 | N | 0.583 | neutral | None | None | None | None | N |
V/Y | 0.8992 | likely_pathogenic | 0.9134 | pathogenic | -1.042 | Destabilizing | 0.949 | D | 0.789 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.