Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20798 | 62617;62618;62619 | chr2:178589333;178589332;178589331 | chr2:179454060;179454059;179454058 |
N2AB | 19157 | 57694;57695;57696 | chr2:178589333;178589332;178589331 | chr2:179454060;179454059;179454058 |
N2A | 18230 | 54913;54914;54915 | chr2:178589333;178589332;178589331 | chr2:179454060;179454059;179454058 |
N2B | 11733 | 35422;35423;35424 | chr2:178589333;178589332;178589331 | chr2:179454060;179454059;179454058 |
Novex-1 | 11858 | 35797;35798;35799 | chr2:178589333;178589332;178589331 | chr2:179454060;179454059;179454058 |
Novex-2 | 11925 | 35998;35999;36000 | chr2:178589333;178589332;178589331 | chr2:179454060;179454059;179454058 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.425 | N | 0.226 | 0.236 | 0.101711395817 | gnomAD-4.0.0 | 1.08029E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.18125E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.2338 | likely_benign | 0.2096 | benign | -1.431 | Destabilizing | 0.495 | N | 0.426 | neutral | None | None | None | None | I |
F/C | 0.234 | likely_benign | 0.2588 | benign | -0.39 | Destabilizing | 0.993 | D | 0.495 | neutral | N | 0.478878343 | None | None | I |
F/D | 0.5764 | likely_pathogenic | 0.5428 | ambiguous | 0.149 | Stabilizing | 0.495 | N | 0.515 | neutral | None | None | None | None | I |
F/E | 0.538 | ambiguous | 0.5266 | ambiguous | 0.154 | Stabilizing | 0.176 | N | 0.433 | neutral | None | None | None | None | I |
F/G | 0.6065 | likely_pathogenic | 0.5521 | ambiguous | -1.678 | Destabilizing | 0.495 | N | 0.521 | neutral | None | None | None | None | I |
F/H | 0.3646 | ambiguous | 0.3334 | benign | -0.2 | Destabilizing | 0.944 | D | 0.475 | neutral | None | None | None | None | I |
F/I | 0.125 | likely_benign | 0.1095 | benign | -0.755 | Destabilizing | 0.784 | D | 0.287 | neutral | N | 0.410653195 | None | None | I |
F/K | 0.5364 | ambiguous | 0.4907 | ambiguous | -0.442 | Destabilizing | 0.013 | N | 0.214 | neutral | None | None | None | None | I |
F/L | 0.5287 | ambiguous | 0.4838 | ambiguous | -0.755 | Destabilizing | 0.425 | N | 0.226 | neutral | N | 0.394606307 | None | None | I |
F/M | 0.2675 | likely_benign | 0.2616 | benign | -0.51 | Destabilizing | 0.944 | D | 0.363 | neutral | None | None | None | None | I |
F/N | 0.3241 | likely_benign | 0.2887 | benign | -0.354 | Destabilizing | 0.704 | D | 0.536 | neutral | None | None | None | None | I |
F/P | 0.5954 | likely_pathogenic | 0.5834 | pathogenic | -0.965 | Destabilizing | 0.828 | D | 0.547 | neutral | None | None | None | None | I |
F/Q | 0.3828 | ambiguous | 0.3567 | ambiguous | -0.453 | Destabilizing | 0.004 | N | 0.22 | neutral | None | None | None | None | I |
F/R | 0.476 | ambiguous | 0.4332 | ambiguous | 0.117 | Stabilizing | 0.329 | N | 0.519 | neutral | None | None | None | None | I |
F/S | 0.1986 | likely_benign | 0.1665 | benign | -1.044 | Destabilizing | 0.425 | N | 0.449 | neutral | N | 0.409439687 | None | None | I |
F/T | 0.2489 | likely_benign | 0.222 | benign | -0.949 | Destabilizing | 0.495 | N | 0.489 | neutral | None | None | None | None | I |
F/V | 0.1154 | likely_benign | 0.1002 | benign | -0.965 | Destabilizing | 0.6 | D | 0.44 | neutral | N | 0.376020547 | None | None | I |
F/W | 0.487 | ambiguous | 0.4744 | ambiguous | -0.421 | Destabilizing | 0.981 | D | 0.41 | neutral | None | None | None | None | I |
F/Y | 0.1197 | likely_benign | 0.1217 | benign | -0.46 | Destabilizing | 0.917 | D | 0.329 | neutral | N | 0.460119224 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.