Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20802 | 62629;62630;62631 | chr2:178589321;178589320;178589319 | chr2:179454048;179454047;179454046 |
N2AB | 19161 | 57706;57707;57708 | chr2:178589321;178589320;178589319 | chr2:179454048;179454047;179454046 |
N2A | 18234 | 54925;54926;54927 | chr2:178589321;178589320;178589319 | chr2:179454048;179454047;179454046 |
N2B | 11737 | 35434;35435;35436 | chr2:178589321;178589320;178589319 | chr2:179454048;179454047;179454046 |
Novex-1 | 11862 | 35809;35810;35811 | chr2:178589321;178589320;178589319 | chr2:179454048;179454047;179454046 |
Novex-2 | 11929 | 36010;36011;36012 | chr2:178589321;178589320;178589319 | chr2:179454048;179454047;179454046 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs1285688683 | None | None | N | 0.249 | 0.085 | 0.124217242631 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs1285688683 | None | None | N | 0.249 | 0.085 | 0.124217242631 | gnomAD-4.0.0 | 6.57748E-06 | None | None | None | None | N | None | 0 | 6.55652E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.2329 | likely_benign | 0.2441 | benign | -0.778 | Destabilizing | 0.356 | N | 0.499 | neutral | None | None | None | None | N |
A/D | 0.3185 | likely_benign | 0.2905 | benign | -0.654 | Destabilizing | 0.038 | N | 0.536 | neutral | None | None | None | None | N |
A/E | 0.2258 | likely_benign | 0.2008 | benign | -0.74 | Destabilizing | 0.012 | N | 0.443 | neutral | N | 0.422022195 | None | None | N |
A/F | 0.1666 | likely_benign | 0.1467 | benign | -0.8 | Destabilizing | 0.12 | N | 0.584 | neutral | None | None | None | None | N |
A/G | 0.1432 | likely_benign | 0.1437 | benign | -0.63 | Destabilizing | 0.012 | N | 0.379 | neutral | N | 0.497618819 | None | None | N |
A/H | 0.2617 | likely_benign | 0.2275 | benign | -0.583 | Destabilizing | 0.356 | N | 0.545 | neutral | None | None | None | None | N |
A/I | 0.0924 | likely_benign | 0.0798 | benign | -0.262 | Destabilizing | 0.006 | N | 0.428 | neutral | None | None | None | None | N |
A/K | 0.3008 | likely_benign | 0.2336 | benign | -0.839 | Destabilizing | None | N | 0.255 | neutral | None | None | None | None | N |
A/L | 0.08 | likely_benign | 0.0707 | benign | -0.262 | Destabilizing | None | N | 0.237 | neutral | None | None | None | None | N |
A/M | 0.1041 | likely_benign | 0.099 | benign | -0.423 | Destabilizing | 0.12 | N | 0.515 | neutral | None | None | None | None | N |
A/N | 0.1401 | likely_benign | 0.1394 | benign | -0.621 | Destabilizing | 0.038 | N | 0.533 | neutral | None | None | None | None | N |
A/P | 0.8907 | likely_pathogenic | 0.8748 | pathogenic | -0.297 | Destabilizing | 0.055 | N | 0.519 | neutral | D | 0.527595009 | None | None | N |
A/Q | 0.1946 | likely_benign | 0.168 | benign | -0.814 | Destabilizing | 0.072 | N | 0.56 | neutral | None | None | None | None | N |
A/R | 0.2962 | likely_benign | 0.2259 | benign | -0.407 | Destabilizing | 0.038 | N | 0.485 | neutral | None | None | None | None | N |
A/S | 0.0693 | likely_benign | 0.0718 | benign | -0.863 | Destabilizing | None | N | 0.255 | neutral | N | 0.380519502 | None | None | N |
A/T | 0.0551 | likely_benign | 0.0549 | benign | -0.854 | Destabilizing | None | N | 0.193 | neutral | N | 0.334635284 | None | None | N |
A/V | 0.0668 | likely_benign | 0.0601 | benign | -0.297 | Destabilizing | None | N | 0.249 | neutral | N | 0.415483012 | None | None | N |
A/W | 0.5319 | ambiguous | 0.4594 | ambiguous | -1.033 | Destabilizing | 0.864 | D | 0.588 | neutral | None | None | None | None | N |
A/Y | 0.2781 | likely_benign | 0.2521 | benign | -0.648 | Destabilizing | 0.356 | N | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.