Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2081 | 6466;6467;6468 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
N2AB | 2081 | 6466;6467;6468 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
N2A | 2081 | 6466;6467;6468 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
N2B | 2035 | 6328;6329;6330 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
Novex-1 | 2035 | 6328;6329;6330 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
Novex-2 | 2035 | 6328;6329;6330 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
Novex-3 | 2081 | 6466;6467;6468 | chr2:178775623;178775622;178775621 | chr2:179640350;179640349;179640348 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.103 | 0.162 | 0.0846915920261 | gnomAD-4.0.0 | 6.84087E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99302E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8303 | likely_pathogenic | 0.8151 | pathogenic | -1.531 | Destabilizing | 0.104 | N | 0.276 | neutral | None | None | None | None | N |
F/C | 0.8049 | likely_pathogenic | 0.7683 | pathogenic | -0.774 | Destabilizing | 0.822 | D | 0.275 | neutral | N | 0.495002959 | None | None | N |
F/D | 0.9701 | likely_pathogenic | 0.971 | pathogenic | -0.15 | Destabilizing | 0.364 | N | 0.367 | neutral | None | None | None | None | N |
F/E | 0.9493 | likely_pathogenic | 0.95 | pathogenic | -0.128 | Destabilizing | 0.22 | N | 0.361 | neutral | None | None | None | None | N |
F/G | 0.9621 | likely_pathogenic | 0.957 | pathogenic | -1.779 | Destabilizing | 0.364 | N | 0.369 | neutral | None | None | None | None | N |
F/H | 0.8432 | likely_pathogenic | 0.8279 | pathogenic | -0.081 | Destabilizing | 0.001 | N | 0.169 | neutral | None | None | None | None | N |
F/I | 0.3761 | ambiguous | 0.4107 | ambiguous | -0.835 | Destabilizing | 0.042 | N | 0.229 | neutral | N | 0.279941455 | None | None | N |
F/K | 0.956 | likely_pathogenic | 0.9526 | pathogenic | -0.775 | Destabilizing | 0.22 | N | 0.361 | neutral | None | None | None | None | N |
F/L | 0.8061 | likely_pathogenic | 0.804 | pathogenic | -0.835 | Destabilizing | None | N | 0.103 | neutral | N | 0.296924232 | None | None | N |
F/M | 0.5937 | likely_pathogenic | 0.6 | pathogenic | -0.71 | Destabilizing | 0.497 | N | 0.303 | neutral | None | None | None | None | N |
F/N | 0.9053 | likely_pathogenic | 0.8959 | pathogenic | -0.866 | Destabilizing | 0.22 | N | 0.351 | neutral | None | None | None | None | N |
F/P | 0.9959 | likely_pathogenic | 0.9955 | pathogenic | -1.054 | Destabilizing | 0.859 | D | 0.321 | neutral | None | None | None | None | N |
F/Q | 0.9076 | likely_pathogenic | 0.9041 | pathogenic | -0.93 | Destabilizing | 0.497 | N | 0.337 | neutral | None | None | None | None | N |
F/R | 0.9128 | likely_pathogenic | 0.9098 | pathogenic | -0.151 | Destabilizing | 0.22 | N | 0.364 | neutral | None | None | None | None | N |
F/S | 0.8003 | likely_pathogenic | 0.7712 | pathogenic | -1.532 | Destabilizing | 0.175 | N | 0.341 | neutral | N | 0.372215449 | None | None | N |
F/T | 0.7317 | likely_pathogenic | 0.7176 | pathogenic | -1.418 | Destabilizing | 0.22 | N | 0.333 | neutral | None | None | None | None | N |
F/V | 0.4079 | ambiguous | 0.4261 | ambiguous | -1.054 | Destabilizing | 0.042 | N | 0.273 | neutral | N | 0.35043671 | None | None | N |
F/W | 0.742 | likely_pathogenic | 0.7182 | pathogenic | -0.321 | Destabilizing | 0.859 | D | 0.339 | neutral | None | None | None | None | N |
F/Y | 0.3561 | ambiguous | 0.3412 | ambiguous | -0.453 | Destabilizing | 0.081 | N | 0.303 | neutral | N | 0.470772961 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.