Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20810 | 62653;62654;62655 | chr2:178589297;178589296;178589295 | chr2:179454024;179454023;179454022 |
N2AB | 19169 | 57730;57731;57732 | chr2:178589297;178589296;178589295 | chr2:179454024;179454023;179454022 |
N2A | 18242 | 54949;54950;54951 | chr2:178589297;178589296;178589295 | chr2:179454024;179454023;179454022 |
N2B | 11745 | 35458;35459;35460 | chr2:178589297;178589296;178589295 | chr2:179454024;179454023;179454022 |
Novex-1 | 11870 | 35833;35834;35835 | chr2:178589297;178589296;178589295 | chr2:179454024;179454023;179454022 |
Novex-2 | 11937 | 36034;36035;36036 | chr2:178589297;178589296;178589295 | chr2:179454024;179454023;179454022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.81 | N | 0.652 | 0.148 | 0.346768085243 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0646 | likely_benign | 0.0654 | benign | -0.31 | Destabilizing | 0.002 | N | 0.235 | neutral | N | 0.478992986 | None | None | N |
T/C | 0.3436 | ambiguous | 0.4021 | ambiguous | -0.204 | Destabilizing | 0.977 | D | 0.593 | neutral | None | None | None | None | N |
T/D | 0.2989 | likely_benign | 0.3376 | benign | 0.238 | Stabilizing | 0.447 | N | 0.603 | neutral | None | None | None | None | N |
T/E | 0.2466 | likely_benign | 0.2733 | benign | 0.158 | Stabilizing | 0.005 | N | 0.405 | neutral | None | None | None | None | N |
T/F | 0.2417 | likely_benign | 0.2933 | benign | -0.844 | Destabilizing | 0.92 | D | 0.613 | neutral | None | None | None | None | N |
T/G | 0.1363 | likely_benign | 0.1435 | benign | -0.426 | Destabilizing | 0.002 | N | 0.425 | neutral | None | None | None | None | N |
T/H | 0.2646 | likely_benign | 0.2875 | benign | -0.71 | Destabilizing | 0.92 | D | 0.591 | neutral | None | None | None | None | N |
T/I | 0.1597 | likely_benign | 0.2038 | benign | -0.126 | Destabilizing | 0.81 | D | 0.652 | neutral | N | 0.450307662 | None | None | N |
T/K | 0.1895 | likely_benign | 0.2037 | benign | -0.304 | Destabilizing | 0.379 | N | 0.59 | neutral | N | 0.458751 | None | None | N |
T/L | 0.0995 | likely_benign | 0.1148 | benign | -0.126 | Destabilizing | 0.447 | N | 0.594 | neutral | None | None | None | None | N |
T/M | 0.1003 | likely_benign | 0.1098 | benign | 0.012 | Stabilizing | 0.972 | D | 0.603 | neutral | None | None | None | None | N |
T/N | 0.1199 | likely_benign | 0.1331 | benign | -0.042 | Destabilizing | 0.617 | D | 0.566 | neutral | None | None | None | None | N |
T/P | 0.1131 | likely_benign | 0.1428 | benign | -0.16 | Destabilizing | 0.712 | D | 0.639 | neutral | D | 0.53263547 | None | None | N |
T/Q | 0.206 | likely_benign | 0.2126 | benign | -0.261 | Destabilizing | 0.739 | D | 0.653 | neutral | None | None | None | None | N |
T/R | 0.1721 | likely_benign | 0.1781 | benign | -0.055 | Destabilizing | 0.81 | D | 0.64 | neutral | N | 0.46344753 | None | None | N |
T/S | 0.0894 | likely_benign | 0.0929 | benign | -0.255 | Destabilizing | 0.045 | N | 0.231 | neutral | N | 0.48562817 | None | None | N |
T/V | 0.1131 | likely_benign | 0.1348 | benign | -0.16 | Destabilizing | 0.447 | N | 0.569 | neutral | None | None | None | None | N |
T/W | 0.5224 | ambiguous | 0.544 | ambiguous | -0.871 | Destabilizing | 0.992 | D | 0.605 | neutral | None | None | None | None | N |
T/Y | 0.2951 | likely_benign | 0.3476 | ambiguous | -0.574 | Destabilizing | 0.972 | D | 0.617 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.