Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20820 | 62683;62684;62685 | chr2:178589267;178589266;178589265 | chr2:179453994;179453993;179453992 |
N2AB | 19179 | 57760;57761;57762 | chr2:178589267;178589266;178589265 | chr2:179453994;179453993;179453992 |
N2A | 18252 | 54979;54980;54981 | chr2:178589267;178589266;178589265 | chr2:179453994;179453993;179453992 |
N2B | 11755 | 35488;35489;35490 | chr2:178589267;178589266;178589265 | chr2:179453994;179453993;179453992 |
Novex-1 | 11880 | 35863;35864;35865 | chr2:178589267;178589266;178589265 | chr2:179453994;179453993;179453992 |
Novex-2 | 11947 | 36064;36065;36066 | chr2:178589267;178589266;178589265 | chr2:179453994;179453993;179453992 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | 0.437 | D | 0.329 | 0.189 | 0.478680857624 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/M | None | None | 0.984 | D | 0.502 | 0.305 | 0.601658297244 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/S | rs369446270 | -1.926 | 0.984 | N | 0.577 | 0.552 | None | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/S | rs369446270 | -1.926 | 0.984 | N | 0.577 | 0.552 | None | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/S | rs369446270 | -1.926 | 0.984 | N | 0.577 | 0.552 | None | gnomAD-4.0.0 | 6.57713E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47132E-05 | 0 | 0 |
I/T | rs369446270 | -1.543 | 0.896 | N | 0.529 | 0.43 | 0.704783393649 | gnomAD-2.1.1 | 3.93E-05 | None | None | None | None | N | None | 0 | 5.66E-05 | None | 0 | 0 | None | 0 | None | 1.60115E-04 | 3.9E-05 | 0 |
I/T | rs369446270 | -1.543 | 0.896 | N | 0.529 | 0.43 | 0.704783393649 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78469E-04 |
I/T | rs369446270 | -1.543 | 0.896 | N | 0.529 | 0.43 | 0.704783393649 | gnomAD-4.0.0 | 4.33891E-05 | None | None | None | None | N | None | 1.33526E-05 | 6.67223E-05 | None | 0 | 0 | None | 2.031E-04 | 0 | 4.15393E-05 | 0 | 4.80461E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4148 | ambiguous | 0.4232 | ambiguous | -1.757 | Destabilizing | 0.851 | D | 0.495 | neutral | None | None | None | None | N |
I/C | 0.8012 | likely_pathogenic | 0.8336 | pathogenic | -1.12 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | N |
I/D | 0.9521 | likely_pathogenic | 0.9529 | pathogenic | -0.941 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
I/E | 0.8457 | likely_pathogenic | 0.8312 | pathogenic | -0.86 | Destabilizing | 0.988 | D | 0.65 | neutral | None | None | None | None | N |
I/F | 0.2413 | likely_benign | 0.2579 | benign | -1.047 | Destabilizing | 0.811 | D | 0.469 | neutral | N | 0.495584739 | None | None | N |
I/G | 0.8627 | likely_pathogenic | 0.8626 | pathogenic | -2.159 | Highly Destabilizing | 0.988 | D | 0.623 | neutral | None | None | None | None | N |
I/H | 0.8372 | likely_pathogenic | 0.8374 | pathogenic | -1.318 | Destabilizing | 0.988 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/K | 0.7393 | likely_pathogenic | 0.7207 | pathogenic | -1.138 | Destabilizing | 0.988 | D | 0.647 | neutral | None | None | None | None | N |
I/L | 0.1857 | likely_benign | 0.1894 | benign | -0.69 | Destabilizing | 0.437 | N | 0.329 | neutral | D | 0.533616905 | None | None | N |
I/M | 0.1006 | likely_benign | 0.101 | benign | -0.641 | Destabilizing | 0.984 | D | 0.502 | neutral | D | 0.537446644 | None | None | N |
I/N | 0.6863 | likely_pathogenic | 0.6867 | pathogenic | -1.07 | Destabilizing | 0.995 | D | 0.683 | prob.neutral | N | 0.519578024 | None | None | N |
I/P | 0.9274 | likely_pathogenic | 0.9414 | pathogenic | -1.016 | Destabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | N |
I/Q | 0.7346 | likely_pathogenic | 0.7245 | pathogenic | -1.109 | Destabilizing | 0.996 | D | 0.686 | prob.neutral | None | None | None | None | N |
I/R | 0.6611 | likely_pathogenic | 0.6379 | pathogenic | -0.704 | Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/S | 0.5712 | likely_pathogenic | 0.5642 | pathogenic | -1.794 | Destabilizing | 0.984 | D | 0.577 | neutral | N | 0.521121733 | None | None | N |
I/T | 0.2334 | likely_benign | 0.2267 | benign | -1.573 | Destabilizing | 0.896 | D | 0.529 | neutral | N | 0.501687579 | None | None | N |
I/V | 0.1027 | likely_benign | 0.1007 | benign | -1.016 | Destabilizing | 0.026 | N | 0.149 | neutral | N | 0.514065565 | None | None | N |
I/W | 0.8044 | likely_pathogenic | 0.8058 | pathogenic | -1.156 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | N |
I/Y | 0.6751 | likely_pathogenic | 0.6882 | pathogenic | -0.914 | Destabilizing | 0.132 | N | 0.285 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.