Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20825 | 62698;62699;62700 | chr2:178589252;178589251;178589250 | chr2:179453979;179453978;179453977 |
N2AB | 19184 | 57775;57776;57777 | chr2:178589252;178589251;178589250 | chr2:179453979;179453978;179453977 |
N2A | 18257 | 54994;54995;54996 | chr2:178589252;178589251;178589250 | chr2:179453979;179453978;179453977 |
N2B | 11760 | 35503;35504;35505 | chr2:178589252;178589251;178589250 | chr2:179453979;179453978;179453977 |
Novex-1 | 11885 | 35878;35879;35880 | chr2:178589252;178589251;178589250 | chr2:179453979;179453978;179453977 |
Novex-2 | 11952 | 36079;36080;36081 | chr2:178589252;178589251;178589250 | chr2:179453979;179453978;179453977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.83 | N | 0.735 | 0.216 | 0.44349138644 | gnomAD-4.0.0 | 6.84326E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65695E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.199 | likely_benign | 0.3039 | benign | -0.124 | Destabilizing | 0.41 | N | 0.682 | prob.neutral | N | 0.502427206 | None | None | N |
D/C | 0.6935 | likely_pathogenic | 0.8025 | pathogenic | 0.082 | Stabilizing | 0.993 | D | 0.724 | prob.delet. | None | None | None | None | N |
D/E | 0.1076 | likely_benign | 0.1992 | benign | -0.229 | Destabilizing | 0.004 | N | 0.246 | neutral | N | 0.463716889 | None | None | N |
D/F | 0.596 | likely_pathogenic | 0.7148 | pathogenic | -0.106 | Destabilizing | 0.993 | D | 0.753 | deleterious | None | None | None | None | N |
D/G | 0.1725 | likely_benign | 0.2352 | benign | -0.278 | Destabilizing | 0.581 | D | 0.66 | neutral | N | 0.41946468 | None | None | N |
D/H | 0.38 | ambiguous | 0.5005 | ambiguous | 0.216 | Stabilizing | 0.974 | D | 0.717 | prob.delet. | N | 0.488556847 | None | None | N |
D/I | 0.4113 | ambiguous | 0.5637 | ambiguous | 0.223 | Stabilizing | 0.929 | D | 0.762 | deleterious | None | None | None | None | N |
D/K | 0.4603 | ambiguous | 0.655 | pathogenic | 0.586 | Stabilizing | 0.764 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/L | 0.4314 | ambiguous | 0.5862 | pathogenic | 0.223 | Stabilizing | 0.866 | D | 0.759 | deleterious | None | None | None | None | N |
D/M | 0.6065 | likely_pathogenic | 0.7435 | pathogenic | 0.242 | Stabilizing | 0.993 | D | 0.739 | prob.delet. | None | None | None | None | N |
D/N | 0.1189 | likely_benign | 0.135 | benign | 0.217 | Stabilizing | 0.83 | D | 0.735 | prob.delet. | N | 0.470893578 | None | None | N |
D/P | 0.7492 | likely_pathogenic | 0.8696 | pathogenic | 0.128 | Stabilizing | 0.929 | D | 0.741 | deleterious | None | None | None | None | N |
D/Q | 0.3433 | ambiguous | 0.5222 | ambiguous | 0.247 | Stabilizing | 0.764 | D | 0.781 | deleterious | None | None | None | None | N |
D/R | 0.525 | ambiguous | 0.6816 | pathogenic | 0.705 | Stabilizing | 0.764 | D | 0.751 | deleterious | None | None | None | None | N |
D/S | 0.1451 | likely_benign | 0.1914 | benign | 0.161 | Stabilizing | 0.48 | N | 0.677 | prob.neutral | None | None | None | None | N |
D/T | 0.2273 | likely_benign | 0.3231 | benign | 0.292 | Stabilizing | 0.866 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/V | 0.2736 | likely_benign | 0.392 | ambiguous | 0.128 | Stabilizing | 0.83 | D | 0.758 | deleterious | N | 0.518340808 | None | None | N |
D/W | 0.8911 | likely_pathogenic | 0.9382 | pathogenic | -0.001 | Destabilizing | 0.993 | D | 0.733 | prob.delet. | None | None | None | None | N |
D/Y | 0.3443 | ambiguous | 0.4118 | ambiguous | 0.136 | Stabilizing | 0.991 | D | 0.753 | deleterious | N | 0.49184764 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.