Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2083 | 6472;6473;6474 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
N2AB | 2083 | 6472;6473;6474 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
N2A | 2083 | 6472;6473;6474 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
N2B | 2037 | 6334;6335;6336 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
Novex-1 | 2037 | 6334;6335;6336 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
Novex-2 | 2037 | 6334;6335;6336 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
Novex-3 | 2083 | 6472;6473;6474 | chr2:178775617;178775616;178775615 | chr2:179640344;179640343;179640342 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.645 | N | 0.647 | 0.33 | 0.529411561632 | gnomAD-4.0.0 | 1.59059E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85654E-06 | 0 | 0 |
R/I | rs781676050 | 0.613 | 0.928 | N | 0.769 | 0.38 | 0.649559452448 | gnomAD-4.0.0 | 9.54356E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.71393E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9436 | likely_pathogenic | 0.948 | pathogenic | -0.292 | Destabilizing | 0.547 | D | 0.619 | neutral | None | None | None | None | I |
R/C | 0.8674 | likely_pathogenic | 0.9128 | pathogenic | -0.483 | Destabilizing | 0.995 | D | 0.74 | deleterious | None | None | None | None | I |
R/D | 0.9758 | likely_pathogenic | 0.978 | pathogenic | 0.013 | Stabilizing | 0.894 | D | 0.725 | prob.delet. | None | None | None | None | I |
R/E | 0.9108 | likely_pathogenic | 0.9177 | pathogenic | 0.111 | Stabilizing | 0.547 | D | 0.559 | neutral | None | None | None | None | I |
R/F | 0.9801 | likely_pathogenic | 0.9792 | pathogenic | -0.338 | Destabilizing | 0.981 | D | 0.75 | deleterious | None | None | None | None | I |
R/G | 0.857 | likely_pathogenic | 0.8681 | pathogenic | -0.539 | Destabilizing | 0.645 | D | 0.647 | neutral | N | 0.455536882 | None | None | I |
R/H | 0.5342 | ambiguous | 0.5863 | pathogenic | -0.886 | Destabilizing | 0.945 | D | 0.673 | neutral | None | None | None | None | I |
R/I | 0.9471 | likely_pathogenic | 0.9435 | pathogenic | 0.342 | Stabilizing | 0.928 | D | 0.769 | deleterious | N | 0.506686501 | None | None | I |
R/K | 0.2812 | likely_benign | 0.2724 | benign | -0.348 | Destabilizing | 0.006 | N | 0.251 | neutral | N | 0.469555164 | None | None | I |
R/L | 0.8812 | likely_pathogenic | 0.8876 | pathogenic | 0.342 | Stabilizing | 0.707 | D | 0.647 | neutral | None | None | None | None | I |
R/M | 0.9246 | likely_pathogenic | 0.9221 | pathogenic | -0.149 | Destabilizing | 0.995 | D | 0.725 | prob.delet. | None | None | None | None | I |
R/N | 0.9625 | likely_pathogenic | 0.9665 | pathogenic | -0.113 | Destabilizing | 0.894 | D | 0.642 | neutral | None | None | None | None | I |
R/P | 0.9074 | likely_pathogenic | 0.9207 | pathogenic | 0.152 | Stabilizing | 0.945 | D | 0.756 | deleterious | None | None | None | None | I |
R/Q | 0.5087 | ambiguous | 0.5788 | pathogenic | -0.203 | Destabilizing | 0.809 | D | 0.637 | neutral | None | None | None | None | I |
R/S | 0.9663 | likely_pathogenic | 0.9723 | pathogenic | -0.636 | Destabilizing | 0.477 | N | 0.689 | prob.neutral | N | 0.507326666 | None | None | I |
R/T | 0.9294 | likely_pathogenic | 0.935 | pathogenic | -0.378 | Destabilizing | 0.864 | D | 0.721 | prob.delet. | N | 0.498678418 | None | None | I |
R/V | 0.9473 | likely_pathogenic | 0.9472 | pathogenic | 0.152 | Stabilizing | 0.894 | D | 0.753 | deleterious | None | None | None | None | I |
R/W | 0.8564 | likely_pathogenic | 0.868 | pathogenic | -0.233 | Destabilizing | 0.995 | D | 0.719 | prob.delet. | None | None | None | None | I |
R/Y | 0.9464 | likely_pathogenic | 0.9476 | pathogenic | 0.131 | Stabilizing | 0.981 | D | 0.754 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.