Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20835 | 62728;62729;62730 | chr2:178589222;178589221;178589220 | chr2:179453949;179453948;179453947 |
N2AB | 19194 | 57805;57806;57807 | chr2:178589222;178589221;178589220 | chr2:179453949;179453948;179453947 |
N2A | 18267 | 55024;55025;55026 | chr2:178589222;178589221;178589220 | chr2:179453949;179453948;179453947 |
N2B | 11770 | 35533;35534;35535 | chr2:178589222;178589221;178589220 | chr2:179453949;179453948;179453947 |
Novex-1 | 11895 | 35908;35909;35910 | chr2:178589222;178589221;178589220 | chr2:179453949;179453948;179453947 |
Novex-2 | 11962 | 36109;36110;36111 | chr2:178589222;178589221;178589220 | chr2:179453949;179453948;179453947 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs765319119 | 0.487 | 0.002 | N | 0.181 | 0.152 | 0.350746614512 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 5.8E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/E | rs765319119 | 0.487 | 0.002 | N | 0.181 | 0.152 | 0.350746614512 | gnomAD-4.0.0 | 1.59182E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4102 | ambiguous | 0.4583 | ambiguous | -0.036 | Destabilizing | 0.067 | N | 0.408 | neutral | None | None | None | None | N |
K/C | 0.6223 | likely_pathogenic | 0.6857 | pathogenic | -0.137 | Destabilizing | 0.935 | D | 0.555 | neutral | None | None | None | None | N |
K/D | 0.7712 | likely_pathogenic | 0.8195 | pathogenic | 0.198 | Stabilizing | 0.081 | N | 0.399 | neutral | None | None | None | None | N |
K/E | 0.3122 | likely_benign | 0.3601 | ambiguous | 0.21 | Stabilizing | 0.002 | N | 0.181 | neutral | N | 0.480878498 | None | None | N |
K/F | 0.8193 | likely_pathogenic | 0.8513 | pathogenic | -0.207 | Destabilizing | 0.555 | D | 0.491 | neutral | None | None | None | None | N |
K/G | 0.5267 | ambiguous | 0.548 | ambiguous | -0.259 | Destabilizing | 0.149 | N | 0.43 | neutral | None | None | None | None | N |
K/H | 0.3753 | ambiguous | 0.4262 | ambiguous | -0.589 | Destabilizing | 0.555 | D | 0.457 | neutral | None | None | None | None | N |
K/I | 0.3971 | ambiguous | 0.4612 | ambiguous | 0.476 | Stabilizing | 0.555 | D | 0.487 | neutral | None | None | None | None | N |
K/L | 0.4061 | ambiguous | 0.4566 | ambiguous | 0.476 | Stabilizing | 0.149 | N | 0.435 | neutral | None | None | None | None | N |
K/M | 0.2903 | likely_benign | 0.3457 | ambiguous | 0.372 | Stabilizing | 0.915 | D | 0.447 | neutral | N | 0.488507621 | None | None | N |
K/N | 0.6064 | likely_pathogenic | 0.6757 | pathogenic | 0.29 | Stabilizing | 0.117 | N | 0.419 | neutral | N | 0.510086684 | None | None | N |
K/P | 0.9545 | likely_pathogenic | 0.9486 | pathogenic | 0.334 | Stabilizing | 0.555 | D | 0.436 | neutral | None | None | None | None | N |
K/Q | 0.1518 | likely_benign | 0.1726 | benign | 0.085 | Stabilizing | 0.117 | N | 0.451 | neutral | N | 0.461274017 | None | None | N |
K/R | 0.0828 | likely_benign | 0.0826 | benign | -0.01 | Destabilizing | None | N | 0.143 | neutral | N | 0.483766874 | None | None | N |
K/S | 0.5197 | ambiguous | 0.5837 | pathogenic | -0.269 | Destabilizing | 0.149 | N | 0.386 | neutral | None | None | None | None | N |
K/T | 0.2169 | likely_benign | 0.268 | benign | -0.1 | Destabilizing | 0.117 | N | 0.415 | neutral | N | 0.439706666 | None | None | N |
K/V | 0.3113 | likely_benign | 0.3608 | ambiguous | 0.334 | Stabilizing | 0.38 | N | 0.423 | neutral | None | None | None | None | N |
K/W | 0.8296 | likely_pathogenic | 0.8459 | pathogenic | -0.177 | Destabilizing | 0.935 | D | 0.621 | neutral | None | None | None | None | N |
K/Y | 0.7336 | likely_pathogenic | 0.7765 | pathogenic | 0.179 | Stabilizing | 0.555 | D | 0.487 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.