Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20844 | 62755;62756;62757 | chr2:178589195;178589194;178589193 | chr2:179453922;179453921;179453920 |
N2AB | 19203 | 57832;57833;57834 | chr2:178589195;178589194;178589193 | chr2:179453922;179453921;179453920 |
N2A | 18276 | 55051;55052;55053 | chr2:178589195;178589194;178589193 | chr2:179453922;179453921;179453920 |
N2B | 11779 | 35560;35561;35562 | chr2:178589195;178589194;178589193 | chr2:179453922;179453921;179453920 |
Novex-1 | 11904 | 35935;35936;35937 | chr2:178589195;178589194;178589193 | chr2:179453922;179453921;179453920 |
Novex-2 | 11971 | 36136;36137;36138 | chr2:178589195;178589194;178589193 | chr2:179453922;179453921;179453920 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs775731244 | -2.275 | 0.104 | N | 0.693 | 0.263 | 0.386882687439 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
V/A | rs775731244 | -2.275 | 0.104 | N | 0.693 | 0.263 | 0.386882687439 | gnomAD-4.0.0 | 2.73721E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63768E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8227 | likely_pathogenic | 0.8191 | pathogenic | -1.807 | Destabilizing | 0.104 | N | 0.693 | prob.neutral | N | 0.492169274 | None | None | N |
V/C | 0.9197 | likely_pathogenic | 0.9354 | pathogenic | -1.207 | Destabilizing | 0.968 | D | 0.746 | deleterious | None | None | None | None | N |
V/D | 0.9984 | likely_pathogenic | 0.9982 | pathogenic | -2.565 | Highly Destabilizing | 0.667 | D | 0.871 | deleterious | N | 0.48201603 | None | None | N |
V/E | 0.9939 | likely_pathogenic | 0.9934 | pathogenic | -2.366 | Highly Destabilizing | 0.726 | D | 0.841 | deleterious | None | None | None | None | N |
V/F | 0.728 | likely_pathogenic | 0.7222 | pathogenic | -1.045 | Destabilizing | 0.497 | N | 0.761 | deleterious | N | 0.462555422 | None | None | N |
V/G | 0.9553 | likely_pathogenic | 0.9523 | pathogenic | -2.318 | Highly Destabilizing | 0.667 | D | 0.866 | deleterious | N | 0.481762541 | None | None | N |
V/H | 0.9973 | likely_pathogenic | 0.9973 | pathogenic | -2.198 | Highly Destabilizing | 0.968 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.056 | likely_benign | 0.0558 | benign | -0.394 | Destabilizing | None | N | 0.309 | neutral | N | 0.394794656 | None | None | N |
V/K | 0.9942 | likely_pathogenic | 0.9936 | pathogenic | -1.584 | Destabilizing | 0.726 | D | 0.84 | deleterious | None | None | None | None | N |
V/L | 0.2203 | likely_benign | 0.2108 | benign | -0.394 | Destabilizing | 0.009 | N | 0.403 | neutral | N | 0.433504973 | None | None | N |
V/M | 0.4182 | ambiguous | 0.4351 | ambiguous | -0.352 | Destabilizing | 0.567 | D | 0.663 | neutral | None | None | None | None | N |
V/N | 0.9916 | likely_pathogenic | 0.9915 | pathogenic | -1.841 | Destabilizing | 0.89 | D | 0.869 | deleterious | None | None | None | None | N |
V/P | 0.9938 | likely_pathogenic | 0.9933 | pathogenic | -0.837 | Destabilizing | 0.89 | D | 0.84 | deleterious | None | None | None | None | N |
V/Q | 0.9912 | likely_pathogenic | 0.9904 | pathogenic | -1.713 | Destabilizing | 0.89 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9901 | likely_pathogenic | 0.9886 | pathogenic | -1.404 | Destabilizing | 0.726 | D | 0.871 | deleterious | None | None | None | None | N |
V/S | 0.9713 | likely_pathogenic | 0.9714 | pathogenic | -2.381 | Highly Destabilizing | 0.726 | D | 0.825 | deleterious | None | None | None | None | N |
V/T | 0.9248 | likely_pathogenic | 0.9224 | pathogenic | -2.051 | Highly Destabilizing | 0.272 | N | 0.724 | prob.delet. | None | None | None | None | N |
V/W | 0.9954 | likely_pathogenic | 0.9951 | pathogenic | -1.649 | Destabilizing | 0.968 | D | 0.845 | deleterious | None | None | None | None | N |
V/Y | 0.9823 | likely_pathogenic | 0.9818 | pathogenic | -1.212 | Destabilizing | 0.726 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.