Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20849 | 62770;62771;62772 | chr2:178589180;178589179;178589178 | chr2:179453907;179453906;179453905 |
N2AB | 19208 | 57847;57848;57849 | chr2:178589180;178589179;178589178 | chr2:179453907;179453906;179453905 |
N2A | 18281 | 55066;55067;55068 | chr2:178589180;178589179;178589178 | chr2:179453907;179453906;179453905 |
N2B | 11784 | 35575;35576;35577 | chr2:178589180;178589179;178589178 | chr2:179453907;179453906;179453905 |
Novex-1 | 11909 | 35950;35951;35952 | chr2:178589180;178589179;178589178 | chr2:179453907;179453906;179453905 |
Novex-2 | 11976 | 36151;36152;36153 | chr2:178589180;178589179;178589178 | chr2:179453907;179453906;179453905 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs372685222 | -0.051 | 0.537 | N | 0.311 | 0.11 | None | gnomAD-2.1.1 | 3.57E-05 | None | None | None | None | I | None | 2.06629E-04 | 0 | None | 0 | 1.54735E-04 | None | 0 | None | 0 | 1.56E-05 | 0 |
T/M | rs372685222 | -0.051 | 0.537 | N | 0.311 | 0.11 | None | gnomAD-3.1.2 | 8.55E-05 | None | None | None | None | I | None | 1.68968E-04 | 6.56E-05 | 0 | 0 | 1.94024E-04 | None | 0 | 0 | 5.88E-05 | 0 | 0 |
T/M | rs372685222 | -0.051 | 0.537 | N | 0.311 | 0.11 | None | gnomAD-4.0.0 | 2.47935E-05 | None | None | None | None | I | None | 2.00304E-04 | 1.66795E-05 | None | 0 | 6.70301E-05 | None | 0 | 0 | 1.78023E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0541 | likely_benign | 0.0565 | benign | -0.195 | Destabilizing | None | N | 0.094 | neutral | N | 0.446765924 | None | None | I |
T/C | 0.3562 | ambiguous | 0.4216 | ambiguous | -0.371 | Destabilizing | 0.628 | D | 0.312 | neutral | None | None | None | None | I |
T/D | 0.316 | likely_benign | 0.3456 | ambiguous | -0.046 | Destabilizing | 0.072 | N | 0.3 | neutral | None | None | None | None | I |
T/E | 0.2472 | likely_benign | 0.2837 | benign | -0.141 | Destabilizing | 0.072 | N | 0.309 | neutral | None | None | None | None | I |
T/F | 0.2593 | likely_benign | 0.2829 | benign | -0.858 | Destabilizing | 0.214 | N | 0.342 | neutral | None | None | None | None | I |
T/G | 0.1564 | likely_benign | 0.1673 | benign | -0.25 | Destabilizing | 0.016 | N | 0.349 | neutral | None | None | None | None | I |
T/H | 0.2234 | likely_benign | 0.2464 | benign | -0.451 | Destabilizing | 0.864 | D | 0.325 | neutral | None | None | None | None | I |
T/I | 0.1221 | likely_benign | 0.1435 | benign | -0.172 | Destabilizing | None | N | 0.283 | neutral | None | None | None | None | I |
T/K | 0.1945 | likely_benign | 0.2129 | benign | -0.326 | Destabilizing | 0.13 | N | 0.311 | neutral | N | 0.455230692 | None | None | I |
T/L | 0.081 | likely_benign | 0.0846 | benign | -0.172 | Destabilizing | None | N | 0.141 | neutral | None | None | None | None | I |
T/M | 0.0837 | likely_benign | 0.0917 | benign | -0.136 | Destabilizing | 0.537 | D | 0.311 | neutral | N | 0.474819317 | None | None | I |
T/N | 0.0989 | likely_benign | 0.1094 | benign | -0.147 | Destabilizing | 0.072 | N | 0.251 | neutral | None | None | None | None | I |
T/P | 0.0696 | likely_benign | 0.0816 | benign | -0.156 | Destabilizing | None | N | 0.119 | neutral | N | 0.445573846 | None | None | I |
T/Q | 0.1729 | likely_benign | 0.2008 | benign | -0.363 | Destabilizing | 0.356 | N | 0.309 | neutral | None | None | None | None | I |
T/R | 0.1949 | likely_benign | 0.2038 | benign | -0.046 | Destabilizing | 0.515 | D | 0.317 | neutral | N | 0.465255684 | None | None | I |
T/S | 0.0773 | likely_benign | 0.0799 | benign | -0.296 | Destabilizing | 0.002 | N | 0.163 | neutral | N | 0.390755139 | None | None | I |
T/V | 0.0954 | likely_benign | 0.1081 | benign | -0.156 | Destabilizing | 0.006 | N | 0.303 | neutral | None | None | None | None | I |
T/W | 0.6525 | likely_pathogenic | 0.6781 | pathogenic | -0.94 | Destabilizing | 0.864 | D | 0.347 | neutral | None | None | None | None | I |
T/Y | 0.3037 | likely_benign | 0.3335 | benign | -0.623 | Destabilizing | 0.356 | N | 0.332 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.