Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20850 | 62773;62774;62775 | chr2:178589177;178589176;178589175 | chr2:179453904;179453903;179453902 |
N2AB | 19209 | 57850;57851;57852 | chr2:178589177;178589176;178589175 | chr2:179453904;179453903;179453902 |
N2A | 18282 | 55069;55070;55071 | chr2:178589177;178589176;178589175 | chr2:179453904;179453903;179453902 |
N2B | 11785 | 35578;35579;35580 | chr2:178589177;178589176;178589175 | chr2:179453904;179453903;179453902 |
Novex-1 | 11910 | 35953;35954;35955 | chr2:178589177;178589176;178589175 | chr2:179453904;179453903;179453902 |
Novex-2 | 11977 | 36154;36155;36156 | chr2:178589177;178589176;178589175 | chr2:179453904;179453903;179453902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs2049701405 | None | 0.085 | N | 0.478 | 0.193 | 0.29527378943 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
A/V | rs2049701405 | None | 0.085 | N | 0.478 | 0.193 | 0.29527378943 | gnomAD-4.0.0 | 6.57583E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6072 | likely_pathogenic | 0.6311 | pathogenic | -0.865 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | I |
A/D | 0.9043 | likely_pathogenic | 0.9117 | pathogenic | -0.595 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | N | 0.518488387 | None | None | I |
A/E | 0.8168 | likely_pathogenic | 0.8414 | pathogenic | -0.751 | Destabilizing | 0.992 | D | 0.699 | prob.neutral | None | None | None | None | I |
A/F | 0.6327 | likely_pathogenic | 0.6322 | pathogenic | -0.951 | Destabilizing | 0.983 | D | 0.756 | deleterious | None | None | None | None | I |
A/G | 0.3362 | likely_benign | 0.3207 | benign | -0.272 | Destabilizing | 0.963 | D | 0.633 | neutral | N | 0.484531149 | None | None | I |
A/H | 0.8066 | likely_pathogenic | 0.8231 | pathogenic | -0.236 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | I |
A/I | 0.4875 | ambiguous | 0.5253 | ambiguous | -0.448 | Destabilizing | 0.745 | D | 0.627 | neutral | None | None | None | None | I |
A/K | 0.9316 | likely_pathogenic | 0.9378 | pathogenic | -0.597 | Destabilizing | 0.992 | D | 0.7 | prob.neutral | None | None | None | None | I |
A/L | 0.4553 | ambiguous | 0.4631 | ambiguous | -0.448 | Destabilizing | 0.895 | D | 0.567 | neutral | None | None | None | None | I |
A/M | 0.4433 | ambiguous | 0.4858 | ambiguous | -0.556 | Destabilizing | 0.996 | D | 0.725 | prob.delet. | None | None | None | None | I |
A/N | 0.6871 | likely_pathogenic | 0.7204 | pathogenic | -0.311 | Destabilizing | 0.997 | D | 0.754 | deleterious | None | None | None | None | I |
A/P | 0.9503 | likely_pathogenic | 0.9426 | pathogenic | -0.361 | Destabilizing | 0.996 | D | 0.711 | prob.delet. | D | 0.530009277 | None | None | I |
A/Q | 0.7488 | likely_pathogenic | 0.7689 | pathogenic | -0.594 | Destabilizing | 0.997 | D | 0.722 | prob.delet. | None | None | None | None | I |
A/R | 0.8785 | likely_pathogenic | 0.878 | pathogenic | -0.124 | Destabilizing | 0.992 | D | 0.72 | prob.delet. | None | None | None | None | I |
A/S | 0.1479 | likely_benign | 0.1526 | benign | -0.487 | Destabilizing | 0.928 | D | 0.633 | neutral | N | 0.463834319 | None | None | I |
A/T | 0.2061 | likely_benign | 0.2143 | benign | -0.572 | Destabilizing | 0.928 | D | 0.666 | neutral | N | 0.490505403 | None | None | I |
A/V | 0.2128 | likely_benign | 0.2306 | benign | -0.361 | Destabilizing | 0.085 | N | 0.478 | neutral | N | 0.483996161 | None | None | I |
A/W | 0.9524 | likely_pathogenic | 0.9455 | pathogenic | -1.043 | Destabilizing | 0.999 | D | 0.758 | deleterious | None | None | None | None | I |
A/Y | 0.8004 | likely_pathogenic | 0.8166 | pathogenic | -0.73 | Destabilizing | 0.992 | D | 0.759 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.