Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20860 | 62803;62804;62805 | chr2:178589147;178589146;178589145 | chr2:179453874;179453873;179453872 |
N2AB | 19219 | 57880;57881;57882 | chr2:178589147;178589146;178589145 | chr2:179453874;179453873;179453872 |
N2A | 18292 | 55099;55100;55101 | chr2:178589147;178589146;178589145 | chr2:179453874;179453873;179453872 |
N2B | 11795 | 35608;35609;35610 | chr2:178589147;178589146;178589145 | chr2:179453874;179453873;179453872 |
Novex-1 | 11920 | 35983;35984;35985 | chr2:178589147;178589146;178589145 | chr2:179453874;179453873;179453872 |
Novex-2 | 11987 | 36184;36185;36186 | chr2:178589147;178589146;178589145 | chr2:179453874;179453873;179453872 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1405326036 | None | 0.008 | N | 0.085 | 0.122 | 0.229264304666 | gnomAD-4.0.0 | 3.42224E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52653E-05 | None | 0 | 0 | 1.79913E-06 | 0 | 3.314E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2706 | likely_benign | 0.2055 | benign | -0.903 | Destabilizing | 0.055 | N | 0.421 | neutral | None | None | None | None | N |
N/C | 0.2995 | likely_benign | 0.2679 | benign | -0.087 | Destabilizing | 0.958 | D | 0.466 | neutral | None | None | None | None | N |
N/D | 0.3134 | likely_benign | 0.3052 | benign | -0.419 | Destabilizing | 0.042 | N | 0.283 | neutral | D | 0.52413063 | None | None | N |
N/E | 0.5063 | ambiguous | 0.4732 | ambiguous | -0.355 | Destabilizing | 0.004 | N | 0.131 | neutral | None | None | None | None | N |
N/F | 0.567 | likely_pathogenic | 0.4916 | ambiguous | -0.738 | Destabilizing | 0.497 | N | 0.52 | neutral | None | None | None | None | N |
N/G | 0.4694 | ambiguous | 0.4107 | ambiguous | -1.206 | Destabilizing | 0.104 | N | 0.257 | neutral | None | None | None | None | N |
N/H | 0.1102 | likely_benign | 0.1008 | benign | -0.919 | Destabilizing | 0.822 | D | 0.425 | neutral | N | 0.517204657 | None | None | N |
N/I | 0.1768 | likely_benign | 0.1215 | benign | -0.148 | Destabilizing | None | N | 0.291 | neutral | N | 0.511470764 | None | None | N |
N/K | 0.3789 | ambiguous | 0.3419 | ambiguous | -0.202 | Destabilizing | 0.175 | N | 0.249 | neutral | N | 0.507600952 | None | None | N |
N/L | 0.2083 | likely_benign | 0.1598 | benign | -0.148 | Destabilizing | 0.02 | N | 0.444 | neutral | None | None | None | None | N |
N/M | 0.2628 | likely_benign | 0.2043 | benign | 0.309 | Stabilizing | 0.497 | N | 0.461 | neutral | None | None | None | None | N |
N/P | 0.9702 | likely_pathogenic | 0.9627 | pathogenic | -0.371 | Destabilizing | 0.667 | D | 0.504 | neutral | None | None | None | None | N |
N/Q | 0.35 | ambiguous | 0.306 | benign | -0.852 | Destabilizing | 0.22 | N | 0.385 | neutral | None | None | None | None | N |
N/R | 0.3823 | ambiguous | 0.3542 | ambiguous | -0.132 | Destabilizing | 0.22 | N | 0.359 | neutral | None | None | None | None | N |
N/S | 0.0968 | likely_benign | 0.0846 | benign | -0.801 | Destabilizing | 0.008 | N | 0.085 | neutral | N | 0.508987819 | None | None | N |
N/T | 0.1056 | likely_benign | 0.0862 | benign | -0.554 | Destabilizing | 0.001 | N | 0.087 | neutral | N | 0.445379058 | None | None | N |
N/V | 0.1839 | likely_benign | 0.1336 | benign | -0.371 | Destabilizing | 0.02 | N | 0.444 | neutral | None | None | None | None | N |
N/W | 0.8133 | likely_pathogenic | 0.7745 | pathogenic | -0.452 | Destabilizing | 0.958 | D | 0.526 | neutral | None | None | None | None | N |
N/Y | 0.2178 | likely_benign | 0.1984 | benign | -0.269 | Destabilizing | 0.602 | D | 0.485 | neutral | N | 0.493049844 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.