Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20861 | 62806;62807;62808 | chr2:178589144;178589143;178589142 | chr2:179453871;179453870;179453869 |
N2AB | 19220 | 57883;57884;57885 | chr2:178589144;178589143;178589142 | chr2:179453871;179453870;179453869 |
N2A | 18293 | 55102;55103;55104 | chr2:178589144;178589143;178589142 | chr2:179453871;179453870;179453869 |
N2B | 11796 | 35611;35612;35613 | chr2:178589144;178589143;178589142 | chr2:179453871;179453870;179453869 |
Novex-1 | 11921 | 35986;35987;35988 | chr2:178589144;178589143;178589142 | chr2:179453871;179453870;179453869 |
Novex-2 | 11988 | 36187;36188;36189 | chr2:178589144;178589143;178589142 | chr2:179453871;179453870;179453869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.743 | 0.806 | 0.847680696271 | gnomAD-4.0.0 | 1.59262E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.76826E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9825 | likely_pathogenic | 0.982 | pathogenic | -1.696 | Destabilizing | 0.999 | D | 0.743 | deleterious | D | 0.627804921 | None | None | N |
V/C | 0.9921 | likely_pathogenic | 0.9912 | pathogenic | -1.516 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
V/D | 0.9993 | likely_pathogenic | 0.9994 | pathogenic | -2.145 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | D | 0.628410334 | None | None | N |
V/E | 0.9979 | likely_pathogenic | 0.9982 | pathogenic | -2.127 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
V/F | 0.9805 | likely_pathogenic | 0.9814 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.60226681 | None | None | N |
V/G | 0.9882 | likely_pathogenic | 0.9887 | pathogenic | -2.017 | Highly Destabilizing | 1.0 | D | 0.779 | deleterious | D | 0.628410334 | None | None | N |
V/H | 0.9994 | likely_pathogenic | 0.9995 | pathogenic | -1.474 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
V/I | 0.1249 | likely_benign | 0.1158 | benign | -0.892 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | N | 0.510194545 | None | None | N |
V/K | 0.9984 | likely_pathogenic | 0.9986 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
V/L | 0.947 | likely_pathogenic | 0.9391 | pathogenic | -0.892 | Destabilizing | 0.997 | D | 0.746 | deleterious | D | 0.609535353 | None | None | N |
V/M | 0.9549 | likely_pathogenic | 0.9541 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/N | 0.9963 | likely_pathogenic | 0.9961 | pathogenic | -1.288 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
V/P | 0.9972 | likely_pathogenic | 0.9967 | pathogenic | -1.129 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/Q | 0.9981 | likely_pathogenic | 0.9983 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/R | 0.9965 | likely_pathogenic | 0.9967 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
V/S | 0.9906 | likely_pathogenic | 0.991 | pathogenic | -1.792 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
V/T | 0.9565 | likely_pathogenic | 0.966 | pathogenic | -1.668 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/W | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
V/Y | 0.9982 | likely_pathogenic | 0.9982 | pathogenic | -1.264 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.