Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20864 | 62815;62816;62817 | chr2:178589135;178589134;178589133 | chr2:179453862;179453861;179453860 |
N2AB | 19223 | 57892;57893;57894 | chr2:178589135;178589134;178589133 | chr2:179453862;179453861;179453860 |
N2A | 18296 | 55111;55112;55113 | chr2:178589135;178589134;178589133 | chr2:179453862;179453861;179453860 |
N2B | 11799 | 35620;35621;35622 | chr2:178589135;178589134;178589133 | chr2:179453862;179453861;179453860 |
Novex-1 | 11924 | 35995;35996;35997 | chr2:178589135;178589134;178589133 | chr2:179453862;179453861;179453860 |
Novex-2 | 11991 | 36196;36197;36198 | chr2:178589135;178589134;178589133 | chr2:179453862;179453861;179453860 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.791 | N | 0.423 | 0.159 | 0.21279746466 | gnomAD-4.0.0 | 1.59304E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78242E-05 | None | 0 | 0 | 0 | 0 | 0 |
K/N | None | None | 0.976 | N | 0.383 | 0.186 | 0.177238962908 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7012 | likely_pathogenic | 0.702 | pathogenic | -0.092 | Destabilizing | 0.338 | N | 0.449 | neutral | None | None | None | None | N |
K/C | 0.7945 | likely_pathogenic | 0.7985 | pathogenic | -0.282 | Destabilizing | 0.995 | D | 0.345 | neutral | None | None | None | None | N |
K/D | 0.9636 | likely_pathogenic | 0.9668 | pathogenic | 0.252 | Stabilizing | 0.982 | D | 0.43 | neutral | None | None | None | None | N |
K/E | 0.614 | likely_pathogenic | 0.653 | pathogenic | 0.27 | Stabilizing | 0.791 | D | 0.423 | neutral | N | 0.464112358 | None | None | N |
K/F | 0.9379 | likely_pathogenic | 0.938 | pathogenic | -0.233 | Destabilizing | 0.946 | D | 0.406 | neutral | None | None | None | None | N |
K/G | 0.9012 | likely_pathogenic | 0.9042 | pathogenic | -0.315 | Destabilizing | 0.834 | D | 0.377 | neutral | None | None | None | None | N |
K/H | 0.6469 | likely_pathogenic | 0.6432 | pathogenic | -0.581 | Destabilizing | 0.995 | D | 0.359 | neutral | None | None | None | None | N |
K/I | 0.3816 | ambiguous | 0.3959 | ambiguous | 0.421 | Stabilizing | 0.032 | N | 0.278 | neutral | None | None | None | None | N |
K/L | 0.6383 | likely_pathogenic | 0.6392 | pathogenic | 0.421 | Stabilizing | 0.338 | N | 0.443 | neutral | None | None | None | None | N |
K/M | 0.4323 | ambiguous | 0.439 | ambiguous | 0.251 | Stabilizing | 0.93 | D | 0.369 | neutral | N | 0.464619337 | None | None | N |
K/N | 0.8775 | likely_pathogenic | 0.8835 | pathogenic | 0.207 | Stabilizing | 0.976 | D | 0.383 | neutral | N | 0.497903168 | None | None | N |
K/P | 0.9036 | likely_pathogenic | 0.9248 | pathogenic | 0.279 | Stabilizing | 0.982 | D | 0.442 | neutral | None | None | None | None | N |
K/Q | 0.3194 | likely_benign | 0.3247 | benign | 0.017 | Stabilizing | 0.976 | D | 0.445 | neutral | N | 0.458035972 | None | None | N |
K/R | 0.098 | likely_benign | 0.0972 | benign | -0.027 | Destabilizing | 0.92 | D | 0.493 | neutral | N | 0.408358599 | None | None | N |
K/S | 0.8331 | likely_pathogenic | 0.8443 | pathogenic | -0.377 | Destabilizing | 0.834 | D | 0.327 | neutral | None | None | None | None | N |
K/T | 0.3494 | ambiguous | 0.3421 | ambiguous | -0.197 | Destabilizing | 0.651 | D | 0.422 | neutral | N | 0.480240127 | None | None | N |
K/V | 0.3369 | likely_benign | 0.3532 | ambiguous | 0.279 | Stabilizing | 0.003 | N | 0.124 | neutral | None | None | None | None | N |
K/W | 0.9584 | likely_pathogenic | 0.9546 | pathogenic | -0.184 | Destabilizing | 0.995 | D | 0.553 | neutral | None | None | None | None | N |
K/Y | 0.8826 | likely_pathogenic | 0.8887 | pathogenic | 0.16 | Stabilizing | 0.982 | D | 0.423 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.