Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20873 | 62842;62843;62844 | chr2:178589108;178589107;178589106 | chr2:179453835;179453834;179453833 |
N2AB | 19232 | 57919;57920;57921 | chr2:178589108;178589107;178589106 | chr2:179453835;179453834;179453833 |
N2A | 18305 | 55138;55139;55140 | chr2:178589108;178589107;178589106 | chr2:179453835;179453834;179453833 |
N2B | 11808 | 35647;35648;35649 | chr2:178589108;178589107;178589106 | chr2:179453835;179453834;179453833 |
Novex-1 | 11933 | 36022;36023;36024 | chr2:178589108;178589107;178589106 | chr2:179453835;179453834;179453833 |
Novex-2 | 12000 | 36223;36224;36225 | chr2:178589108;178589107;178589106 | chr2:179453835;179453834;179453833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.001 | N | 0.375 | 0.083 | 0.144782658237 | gnomAD-4.0.0 | 1.59683E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78381E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1060500438 | None | 0.117 | N | 0.578 | 0.373 | 0.531389887418 | gnomAD-4.0.0 | 1.59683E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4583 | ambiguous | 0.3225 | benign | -2.098 | Highly Destabilizing | 0.035 | N | 0.549 | neutral | None | None | None | None | N |
I/C | 0.78 | likely_pathogenic | 0.739 | pathogenic | -1.303 | Destabilizing | 0.935 | D | 0.612 | neutral | None | None | None | None | N |
I/D | 0.9788 | likely_pathogenic | 0.9674 | pathogenic | -1.706 | Destabilizing | 0.791 | D | 0.702 | prob.neutral | None | None | None | None | N |
I/E | 0.9642 | likely_pathogenic | 0.9456 | pathogenic | -1.569 | Destabilizing | 0.555 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/F | 0.2478 | likely_benign | 0.2328 | benign | -1.235 | Destabilizing | 0.001 | N | 0.375 | neutral | N | 0.501221193 | None | None | N |
I/G | 0.9129 | likely_pathogenic | 0.8554 | pathogenic | -2.568 | Highly Destabilizing | 0.555 | D | 0.698 | prob.neutral | None | None | None | None | N |
I/H | 0.9449 | likely_pathogenic | 0.9187 | pathogenic | -1.864 | Destabilizing | 0.935 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/K | 0.9529 | likely_pathogenic | 0.9324 | pathogenic | -1.541 | Destabilizing | 0.555 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/L | 0.1942 | likely_benign | 0.1686 | benign | -0.8 | Destabilizing | None | N | 0.204 | neutral | N | 0.466993976 | None | None | N |
I/M | 0.151 | likely_benign | 0.1243 | benign | -0.642 | Destabilizing | 0.317 | N | 0.577 | neutral | N | 0.477764794 | None | None | N |
I/N | 0.8264 | likely_pathogenic | 0.7557 | pathogenic | -1.579 | Destabilizing | 0.741 | D | 0.71 | prob.delet. | N | 0.493667003 | None | None | N |
I/P | 0.7711 | likely_pathogenic | 0.6813 | pathogenic | -1.206 | Destabilizing | 0.791 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/Q | 0.9372 | likely_pathogenic | 0.9045 | pathogenic | -1.559 | Destabilizing | 0.791 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/R | 0.9219 | likely_pathogenic | 0.89 | pathogenic | -1.148 | Destabilizing | 0.555 | D | 0.71 | prob.delet. | None | None | None | None | N |
I/S | 0.7403 | likely_pathogenic | 0.6116 | pathogenic | -2.302 | Highly Destabilizing | 0.484 | N | 0.654 | neutral | N | 0.474802279 | None | None | N |
I/T | 0.3824 | ambiguous | 0.2468 | benign | -2.023 | Highly Destabilizing | 0.117 | N | 0.578 | neutral | N | 0.486412074 | None | None | N |
I/V | 0.083 | likely_benign | 0.0725 | benign | -1.206 | Destabilizing | None | N | 0.174 | neutral | N | 0.406057373 | None | None | N |
I/W | 0.9273 | likely_pathogenic | 0.9207 | pathogenic | -1.475 | Destabilizing | 0.824 | D | 0.697 | prob.neutral | None | None | None | None | N |
I/Y | 0.7968 | likely_pathogenic | 0.7808 | pathogenic | -1.208 | Destabilizing | 0.235 | N | 0.622 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.