Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20879 | 62860;62861;62862 | chr2:178589090;178589089;178589088 | chr2:179453817;179453816;179453815 |
N2AB | 19238 | 57937;57938;57939 | chr2:178589090;178589089;178589088 | chr2:179453817;179453816;179453815 |
N2A | 18311 | 55156;55157;55158 | chr2:178589090;178589089;178589088 | chr2:179453817;179453816;179453815 |
N2B | 11814 | 35665;35666;35667 | chr2:178589090;178589089;178589088 | chr2:179453817;179453816;179453815 |
Novex-1 | 11939 | 36040;36041;36042 | chr2:178589090;178589089;178589088 | chr2:179453817;179453816;179453815 |
Novex-2 | 12006 | 36241;36242;36243 | chr2:178589090;178589089;178589088 | chr2:179453817;179453816;179453815 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 1.0 | N | 0.595 | 0.37 | 0.24896430686 | gnomAD-4.0.0 | 6.85819E-07 | None | None | None | None | N | None | 2.98882E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6804 | likely_pathogenic | 0.606 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.474789053 | None | None | N |
D/C | 0.9275 | likely_pathogenic | 0.9078 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
D/E | 0.3609 | ambiguous | 0.3053 | benign | -0.485 | Destabilizing | 1.0 | D | 0.429 | neutral | N | 0.509688747 | None | None | N |
D/F | 0.9195 | likely_pathogenic | 0.8875 | pathogenic | -0.67 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
D/G | 0.5872 | likely_pathogenic | 0.5088 | ambiguous | -0.675 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.469179965 | None | None | N |
D/H | 0.7892 | likely_pathogenic | 0.7482 | pathogenic | -0.82 | Destabilizing | 1.0 | D | 0.742 | deleterious | D | 0.524484841 | None | None | N |
D/I | 0.8724 | likely_pathogenic | 0.8316 | pathogenic | -0.004 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
D/K | 0.8875 | likely_pathogenic | 0.8584 | pathogenic | 0.255 | Stabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
D/L | 0.8312 | likely_pathogenic | 0.7895 | pathogenic | -0.004 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
D/M | 0.9199 | likely_pathogenic | 0.8938 | pathogenic | 0.418 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
D/N | 0.2685 | likely_benign | 0.2336 | benign | 0.029 | Stabilizing | 1.0 | D | 0.595 | neutral | N | 0.478248332 | None | None | N |
D/P | 0.9812 | likely_pathogenic | 0.9723 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
D/Q | 0.7842 | likely_pathogenic | 0.7352 | pathogenic | 0.021 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
D/R | 0.8924 | likely_pathogenic | 0.8617 | pathogenic | 0.205 | Stabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
D/S | 0.3778 | ambiguous | 0.3267 | benign | -0.092 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/T | 0.5941 | likely_pathogenic | 0.5298 | ambiguous | 0.061 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
D/V | 0.7406 | likely_pathogenic | 0.6827 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.495615559 | None | None | N |
D/W | 0.981 | likely_pathogenic | 0.9739 | pathogenic | -0.582 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
D/Y | 0.7083 | likely_pathogenic | 0.6479 | pathogenic | -0.439 | Destabilizing | 1.0 | D | 0.789 | deleterious | N | 0.506718375 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.