Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20883 | 62872;62873;62874 | chr2:178589078;178589077;178589076 | chr2:179453805;179453804;179453803 |
N2AB | 19242 | 57949;57950;57951 | chr2:178589078;178589077;178589076 | chr2:179453805;179453804;179453803 |
N2A | 18315 | 55168;55169;55170 | chr2:178589078;178589077;178589076 | chr2:179453805;179453804;179453803 |
N2B | 11818 | 35677;35678;35679 | chr2:178589078;178589077;178589076 | chr2:179453805;179453804;179453803 |
Novex-1 | 11943 | 36052;36053;36054 | chr2:178589078;178589077;178589076 | chr2:179453805;179453804;179453803 |
Novex-2 | 12010 | 36253;36254;36255 | chr2:178589078;178589077;178589076 | chr2:179453805;179453804;179453803 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.219 | 0.046 | 0.220303561663 | gnomAD-4.0.0 | 6.86056E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99596E-07 | 0 | 0 |
V/L | None | None | None | N | 0.257 | 0.025 | 0.0482279557977 | gnomAD-4.0.0 | 6.86056E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99596E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6597 | likely_pathogenic | 0.5916 | pathogenic | -1.994 | Destabilizing | 0.052 | N | 0.638 | neutral | N | 0.487439259 | None | None | N |
V/C | 0.9026 | likely_pathogenic | 0.8707 | pathogenic | -1.603 | Destabilizing | 0.935 | D | 0.77 | deleterious | None | None | None | None | N |
V/D | 0.9966 | likely_pathogenic | 0.9953 | pathogenic | -2.924 | Highly Destabilizing | 0.484 | N | 0.852 | deleterious | N | 0.517913777 | None | None | N |
V/E | 0.9906 | likely_pathogenic | 0.9879 | pathogenic | -2.603 | Highly Destabilizing | 0.555 | D | 0.798 | deleterious | None | None | None | None | N |
V/F | 0.5098 | ambiguous | 0.4569 | ambiguous | -1.138 | Destabilizing | 0.001 | N | 0.621 | neutral | N | 0.484552423 | None | None | N |
V/G | 0.8989 | likely_pathogenic | 0.8563 | pathogenic | -2.628 | Highly Destabilizing | 0.484 | N | 0.809 | deleterious | N | 0.517660288 | None | None | N |
V/H | 0.9944 | likely_pathogenic | 0.9926 | pathogenic | -2.695 | Highly Destabilizing | 0.935 | D | 0.866 | deleterious | None | None | None | None | N |
V/I | 0.0636 | likely_benign | 0.0673 | benign | -0.167 | Destabilizing | None | N | 0.219 | neutral | N | 0.50212527 | None | None | N |
V/K | 0.9914 | likely_pathogenic | 0.99 | pathogenic | -1.619 | Destabilizing | 0.555 | D | 0.778 | deleterious | None | None | None | None | N |
V/L | 0.1471 | likely_benign | 0.1202 | benign | -0.167 | Destabilizing | None | N | 0.257 | neutral | N | 0.394485224 | None | None | N |
V/M | 0.3249 | likely_benign | 0.2951 | benign | -0.451 | Destabilizing | 0.235 | N | 0.663 | neutral | None | None | None | None | N |
V/N | 0.9859 | likely_pathogenic | 0.9813 | pathogenic | -2.272 | Highly Destabilizing | 0.791 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.9799 | likely_pathogenic | 0.9733 | pathogenic | -0.753 | Destabilizing | 0.791 | D | 0.831 | deleterious | None | None | None | None | N |
V/Q | 0.9868 | likely_pathogenic | 0.9829 | pathogenic | -1.893 | Destabilizing | 0.791 | D | 0.837 | deleterious | None | None | None | None | N |
V/R | 0.9847 | likely_pathogenic | 0.9824 | pathogenic | -1.827 | Destabilizing | 0.555 | D | 0.855 | deleterious | None | None | None | None | N |
V/S | 0.9447 | likely_pathogenic | 0.928 | pathogenic | -2.835 | Highly Destabilizing | 0.555 | D | 0.765 | deleterious | None | None | None | None | N |
V/T | 0.862 | likely_pathogenic | 0.8358 | pathogenic | -2.339 | Highly Destabilizing | 0.149 | N | 0.655 | neutral | None | None | None | None | N |
V/W | 0.9921 | likely_pathogenic | 0.9881 | pathogenic | -1.765 | Destabilizing | 0.935 | D | 0.859 | deleterious | None | None | None | None | N |
V/Y | 0.9607 | likely_pathogenic | 0.9528 | pathogenic | -1.339 | Destabilizing | 0.235 | N | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.