Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20887 | 62884;62885;62886 | chr2:178589066;178589065;178589064 | chr2:179453793;179453792;179453791 |
N2AB | 19246 | 57961;57962;57963 | chr2:178589066;178589065;178589064 | chr2:179453793;179453792;179453791 |
N2A | 18319 | 55180;55181;55182 | chr2:178589066;178589065;178589064 | chr2:179453793;179453792;179453791 |
N2B | 11822 | 35689;35690;35691 | chr2:178589066;178589065;178589064 | chr2:179453793;179453792;179453791 |
Novex-1 | 11947 | 36064;36065;36066 | chr2:178589066;178589065;178589064 | chr2:179453793;179453792;179453791 |
Novex-2 | 12014 | 36265;36266;36267 | chr2:178589066;178589065;178589064 | chr2:179453793;179453792;179453791 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.921 | N | 0.532 | 0.356 | 0.449088463789 | gnomAD-4.0.0 | 1.6025E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85969E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0665 | likely_benign | 0.0651 | benign | -1.984 | Destabilizing | 0.238 | N | 0.219 | neutral | N | 0.484294444 | None | None | N |
P/C | 0.4373 | ambiguous | 0.4184 | ambiguous | -1.388 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
P/D | 0.538 | ambiguous | 0.51 | ambiguous | -2.273 | Highly Destabilizing | 0.939 | D | 0.48 | neutral | None | None | None | None | N |
P/E | 0.2621 | likely_benign | 0.2471 | benign | -2.141 | Highly Destabilizing | 0.293 | N | 0.347 | neutral | None | None | None | None | N |
P/F | 0.397 | ambiguous | 0.3674 | ambiguous | -1.322 | Destabilizing | 0.995 | D | 0.617 | neutral | None | None | None | None | N |
P/G | 0.3589 | ambiguous | 0.3136 | benign | -2.431 | Highly Destabilizing | 0.039 | N | 0.383 | neutral | None | None | None | None | N |
P/H | 0.2193 | likely_benign | 0.2028 | benign | -1.964 | Destabilizing | 1.0 | D | 0.589 | neutral | None | None | None | None | N |
P/I | 0.1477 | likely_benign | 0.1558 | benign | -0.782 | Destabilizing | 0.489 | N | 0.437 | neutral | None | None | None | None | N |
P/K | 0.2272 | likely_benign | 0.2252 | benign | -1.799 | Destabilizing | 0.969 | D | 0.477 | neutral | None | None | None | None | N |
P/L | 0.0809 | likely_benign | 0.0815 | benign | -0.782 | Destabilizing | 0.921 | D | 0.532 | neutral | N | 0.484733915 | None | None | N |
P/M | 0.1893 | likely_benign | 0.1908 | benign | -0.634 | Destabilizing | 0.995 | D | 0.597 | neutral | None | None | None | None | N |
P/N | 0.3578 | ambiguous | 0.3465 | ambiguous | -1.849 | Destabilizing | 0.995 | D | 0.621 | neutral | None | None | None | None | N |
P/Q | 0.1485 | likely_benign | 0.136 | benign | -1.853 | Destabilizing | 0.988 | D | 0.614 | neutral | N | 0.478897792 | None | None | N |
P/R | 0.1812 | likely_benign | 0.1697 | benign | -1.376 | Destabilizing | 0.988 | D | 0.618 | neutral | D | 0.525066418 | None | None | N |
P/S | 0.1334 | likely_benign | 0.1246 | benign | -2.416 | Highly Destabilizing | 0.921 | D | 0.492 | neutral | N | 0.487518619 | None | None | N |
P/T | 0.0983 | likely_benign | 0.098 | benign | -2.153 | Highly Destabilizing | 0.959 | D | 0.476 | neutral | N | 0.487772108 | None | None | N |
P/V | 0.1141 | likely_benign | 0.1162 | benign | -1.152 | Destabilizing | 0.864 | D | 0.489 | neutral | None | None | None | None | N |
P/W | 0.7018 | likely_pathogenic | 0.6551 | pathogenic | -1.679 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
P/Y | 0.4439 | ambiguous | 0.421 | ambiguous | -1.347 | Destabilizing | 0.999 | D | 0.616 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.