Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20896 | 62911;62912;62913 | chr2:178589039;178589038;178589037 | chr2:179453766;179453765;179453764 |
N2AB | 19255 | 57988;57989;57990 | chr2:178589039;178589038;178589037 | chr2:179453766;179453765;179453764 |
N2A | 18328 | 55207;55208;55209 | chr2:178589039;178589038;178589037 | chr2:179453766;179453765;179453764 |
N2B | 11831 | 35716;35717;35718 | chr2:178589039;178589038;178589037 | chr2:179453766;179453765;179453764 |
Novex-1 | 11956 | 36091;36092;36093 | chr2:178589039;178589038;178589037 | chr2:179453766;179453765;179453764 |
Novex-2 | 12023 | 36292;36293;36294 | chr2:178589039;178589038;178589037 | chr2:179453766;179453765;179453764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.994 | D | 0.659 | 0.417 | 0.614155820699 | gnomAD-4.0.0 | 1.60181E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86022E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9888 | likely_pathogenic | 0.9889 | pathogenic | -2.488 | Highly Destabilizing | 0.931 | D | 0.687 | prob.neutral | None | None | None | None | I |
I/C | 0.9866 | likely_pathogenic | 0.9882 | pathogenic | -1.438 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
I/D | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -2.667 | Highly Destabilizing | 0.999 | D | 0.838 | deleterious | None | None | None | None | I |
I/E | 0.9963 | likely_pathogenic | 0.996 | pathogenic | -2.586 | Highly Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | I |
I/F | 0.9272 | likely_pathogenic | 0.9272 | pathogenic | -1.724 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | D | 0.525688912 | None | None | I |
I/G | 0.9973 | likely_pathogenic | 0.997 | pathogenic | -2.903 | Highly Destabilizing | 0.999 | D | 0.846 | deleterious | None | None | None | None | I |
I/H | 0.9974 | likely_pathogenic | 0.9973 | pathogenic | -2.258 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
I/K | 0.9899 | likely_pathogenic | 0.9907 | pathogenic | -1.881 | Destabilizing | 0.999 | D | 0.833 | deleterious | None | None | None | None | I |
I/L | 0.4623 | ambiguous | 0.4626 | ambiguous | -1.336 | Destabilizing | 0.689 | D | 0.391 | neutral | N | 0.480085879 | None | None | I |
I/M | 0.6186 | likely_pathogenic | 0.6302 | pathogenic | -0.892 | Destabilizing | 0.994 | D | 0.659 | neutral | D | 0.528223807 | None | None | I |
I/N | 0.9745 | likely_pathogenic | 0.9731 | pathogenic | -1.814 | Destabilizing | 0.998 | D | 0.841 | deleterious | D | 0.529237765 | None | None | I |
I/P | 0.9736 | likely_pathogenic | 0.9721 | pathogenic | -1.697 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
I/Q | 0.9941 | likely_pathogenic | 0.9939 | pathogenic | -1.922 | Destabilizing | 0.999 | D | 0.841 | deleterious | None | None | None | None | I |
I/R | 0.9901 | likely_pathogenic | 0.9903 | pathogenic | -1.275 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | I |
I/S | 0.9891 | likely_pathogenic | 0.9883 | pathogenic | -2.389 | Highly Destabilizing | 0.994 | D | 0.827 | deleterious | D | 0.528477296 | None | None | I |
I/T | 0.9729 | likely_pathogenic | 0.9737 | pathogenic | -2.196 | Highly Destabilizing | 0.961 | D | 0.739 | prob.delet. | N | 0.521893931 | None | None | I |
I/V | 0.2122 | likely_benign | 0.2201 | benign | -1.697 | Destabilizing | 0.122 | N | 0.211 | neutral | N | 0.473770806 | None | None | I |
I/W | 0.9976 | likely_pathogenic | 0.9974 | pathogenic | -2.0 | Highly Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
I/Y | 0.9873 | likely_pathogenic | 0.9877 | pathogenic | -1.811 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.