Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20898 | 62917;62918;62919 | chr2:178589033;178589032;178589031 | chr2:179453760;179453759;179453758 |
N2AB | 19257 | 57994;57995;57996 | chr2:178589033;178589032;178589031 | chr2:179453760;179453759;179453758 |
N2A | 18330 | 55213;55214;55215 | chr2:178589033;178589032;178589031 | chr2:179453760;179453759;179453758 |
N2B | 11833 | 35722;35723;35724 | chr2:178589033;178589032;178589031 | chr2:179453760;179453759;179453758 |
Novex-1 | 11958 | 36097;36098;36099 | chr2:178589033;178589032;178589031 | chr2:179453760;179453759;179453758 |
Novex-2 | 12025 | 36298;36299;36300 | chr2:178589033;178589032;178589031 | chr2:179453760;179453759;179453758 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs778236151 | -0.613 | 0.961 | N | 0.578 | 0.235 | 0.149567049428 | gnomAD-2.1.1 | 4.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
N/K | rs778236151 | -0.613 | 0.961 | N | 0.578 | 0.235 | 0.149567049428 | gnomAD-4.0.0 | 1.60076E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86038E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7813 | likely_pathogenic | 0.7803 | pathogenic | -1.222 | Destabilizing | 0.871 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/C | 0.5551 | ambiguous | 0.5894 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
N/D | 0.7415 | likely_pathogenic | 0.6966 | pathogenic | -1.509 | Destabilizing | 0.961 | D | 0.558 | neutral | N | 0.513035697 | None | None | N |
N/E | 0.9443 | likely_pathogenic | 0.9375 | pathogenic | -1.3 | Destabilizing | 0.97 | D | 0.571 | neutral | None | None | None | None | N |
N/F | 0.941 | likely_pathogenic | 0.926 | pathogenic | -0.634 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
N/G | 0.5675 | likely_pathogenic | 0.5627 | ambiguous | -1.625 | Destabilizing | 0.931 | D | 0.588 | neutral | None | None | None | None | N |
N/H | 0.2848 | likely_benign | 0.2553 | benign | -1.058 | Destabilizing | 0.998 | D | 0.615 | neutral | N | 0.46535918 | None | None | N |
N/I | 0.9504 | likely_pathogenic | 0.948 | pathogenic | -0.15 | Destabilizing | 0.994 | D | 0.828 | deleterious | N | 0.481270286 | None | None | N |
N/K | 0.8893 | likely_pathogenic | 0.87 | pathogenic | -0.424 | Destabilizing | 0.961 | D | 0.578 | neutral | N | 0.502490629 | None | None | N |
N/L | 0.9072 | likely_pathogenic | 0.9045 | pathogenic | -0.15 | Destabilizing | 0.985 | D | 0.779 | deleterious | None | None | None | None | N |
N/M | 0.9128 | likely_pathogenic | 0.913 | pathogenic | 0.112 | Stabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/P | 0.9971 | likely_pathogenic | 0.9962 | pathogenic | -0.48 | Destabilizing | 0.996 | D | 0.753 | deleterious | None | None | None | None | N |
N/Q | 0.835 | likely_pathogenic | 0.8238 | pathogenic | -1.024 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | N |
N/R | 0.8507 | likely_pathogenic | 0.8295 | pathogenic | -0.539 | Destabilizing | 0.996 | D | 0.61 | neutral | None | None | None | None | N |
N/S | 0.2251 | likely_benign | 0.2327 | benign | -1.337 | Destabilizing | 0.287 | N | 0.257 | neutral | N | 0.457238342 | None | None | N |
N/T | 0.698 | likely_pathogenic | 0.6761 | pathogenic | -0.935 | Destabilizing | 0.925 | D | 0.576 | neutral | D | 0.523636692 | None | None | N |
N/V | 0.9311 | likely_pathogenic | 0.9294 | pathogenic | -0.48 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
N/W | 0.9724 | likely_pathogenic | 0.9621 | pathogenic | -0.419 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
N/Y | 0.4917 | ambiguous | 0.4373 | ambiguous | -0.152 | Destabilizing | 0.998 | D | 0.771 | deleterious | N | 0.467178502 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.