Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20899 | 62920;62921;62922 | chr2:178589030;178589029;178589028 | chr2:179453757;179453756;179453755 |
N2AB | 19258 | 57997;57998;57999 | chr2:178589030;178589029;178589028 | chr2:179453757;179453756;179453755 |
N2A | 18331 | 55216;55217;55218 | chr2:178589030;178589029;178589028 | chr2:179453757;179453756;179453755 |
N2B | 11834 | 35725;35726;35727 | chr2:178589030;178589029;178589028 | chr2:179453757;179453756;179453755 |
Novex-1 | 11959 | 36100;36101;36102 | chr2:178589030;178589029;178589028 | chr2:179453757;179453756;179453755 |
Novex-2 | 12026 | 36301;36302;36303 | chr2:178589030;178589029;178589028 | chr2:179453757;179453756;179453755 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs564111693 | -1.807 | 1.0 | D | 0.877 | 0.815 | 0.890340196367 | gnomAD-2.1.1 | 8.16E-06 | None | None | None | None | N | None | 0 | 5.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/C | rs564111693 | -1.807 | 1.0 | D | 0.877 | 0.815 | 0.890340196367 | gnomAD-4.0.0 | 8.00228E-06 | None | None | None | None | N | None | 0 | 6.87348E-05 | None | 0 | 0 | None | 0 | 0 | 5.72099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9965 | likely_pathogenic | 0.9956 | pathogenic | -3.525 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/C | 0.9168 | likely_pathogenic | 0.9117 | pathogenic | -1.973 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.642118767 | None | None | N |
Y/D | 0.9968 | likely_pathogenic | 0.996 | pathogenic | -3.85 | Highly Destabilizing | 1.0 | D | 0.908 | deleterious | D | 0.642522375 | None | None | N |
Y/E | 0.9993 | likely_pathogenic | 0.9991 | pathogenic | -3.627 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
Y/F | 0.2184 | likely_benign | 0.2159 | benign | -1.375 | Destabilizing | 0.999 | D | 0.649 | neutral | D | 0.561296903 | None | None | N |
Y/G | 0.9923 | likely_pathogenic | 0.9905 | pathogenic | -3.941 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | None | None | None | None | N |
Y/H | 0.9668 | likely_pathogenic | 0.96 | pathogenic | -2.648 | Highly Destabilizing | 1.0 | D | 0.796 | deleterious | D | 0.642118767 | None | None | N |
Y/I | 0.9747 | likely_pathogenic | 0.9706 | pathogenic | -2.112 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/K | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -2.458 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
Y/L | 0.952 | likely_pathogenic | 0.9446 | pathogenic | -2.112 | Highly Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
Y/M | 0.9846 | likely_pathogenic | 0.9824 | pathogenic | -1.863 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Y/N | 0.9774 | likely_pathogenic | 0.9728 | pathogenic | -3.273 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | D | 0.642522375 | None | None | N |
Y/P | 0.9995 | likely_pathogenic | 0.9994 | pathogenic | -2.604 | Highly Destabilizing | 1.0 | D | 0.935 | deleterious | None | None | None | None | N |
Y/Q | 0.9982 | likely_pathogenic | 0.9976 | pathogenic | -2.993 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/R | 0.9937 | likely_pathogenic | 0.9929 | pathogenic | -2.258 | Highly Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | N |
Y/S | 0.988 | likely_pathogenic | 0.9844 | pathogenic | -3.586 | Highly Destabilizing | 1.0 | D | 0.904 | deleterious | D | 0.642522375 | None | None | N |
Y/T | 0.995 | likely_pathogenic | 0.9935 | pathogenic | -3.24 | Highly Destabilizing | 1.0 | D | 0.906 | deleterious | None | None | None | None | N |
Y/V | 0.953 | likely_pathogenic | 0.946 | pathogenic | -2.604 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Y/W | 0.8493 | likely_pathogenic | 0.8501 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.