Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20912 | 62959;62960;62961 | chr2:178588991;178588990;178588989 | chr2:179453718;179453717;179453716 |
N2AB | 19271 | 58036;58037;58038 | chr2:178588991;178588990;178588989 | chr2:179453718;179453717;179453716 |
N2A | 18344 | 55255;55256;55257 | chr2:178588991;178588990;178588989 | chr2:179453718;179453717;179453716 |
N2B | 11847 | 35764;35765;35766 | chr2:178588991;178588990;178588989 | chr2:179453718;179453717;179453716 |
Novex-1 | 11972 | 36139;36140;36141 | chr2:178588991;178588990;178588989 | chr2:179453718;179453717;179453716 |
Novex-2 | 12039 | 36340;36341;36342 | chr2:178588991;178588990;178588989 | chr2:179453718;179453717;179453716 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs2049657792 | None | 0.991 | N | 0.688 | 0.405 | 0.721781199316 | gnomAD-4.0.0 | 2.74014E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59928E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1903 | likely_benign | 0.2208 | benign | -0.701 | Destabilizing | 0.76 | D | 0.409 | neutral | N | 0.49970104 | None | None | I |
S/C | 0.339 | likely_benign | 0.39 | ambiguous | -0.524 | Destabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.501349551 | None | None | I |
S/D | 0.9384 | likely_pathogenic | 0.9505 | pathogenic | -0.003 | Destabilizing | 0.953 | D | 0.541 | neutral | None | None | None | None | I |
S/E | 0.9464 | likely_pathogenic | 0.9533 | pathogenic | -0.044 | Destabilizing | 0.953 | D | 0.542 | neutral | None | None | None | None | I |
S/F | 0.7789 | likely_pathogenic | 0.8185 | pathogenic | -0.972 | Destabilizing | 0.991 | D | 0.688 | prob.neutral | N | 0.485830453 | None | None | I |
S/G | 0.2557 | likely_benign | 0.2995 | benign | -0.901 | Destabilizing | 0.953 | D | 0.485 | neutral | None | None | None | None | I |
S/H | 0.8313 | likely_pathogenic | 0.8538 | pathogenic | -1.332 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
S/I | 0.6092 | likely_pathogenic | 0.6984 | pathogenic | -0.287 | Destabilizing | 0.986 | D | 0.702 | prob.neutral | None | None | None | None | I |
S/K | 0.9841 | likely_pathogenic | 0.988 | pathogenic | -0.744 | Destabilizing | 0.953 | D | 0.537 | neutral | None | None | None | None | I |
S/L | 0.3822 | ambiguous | 0.4786 | ambiguous | -0.287 | Destabilizing | 0.91 | D | 0.544 | neutral | None | None | None | None | I |
S/M | 0.4405 | ambiguous | 0.5122 | ambiguous | -0.074 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | I |
S/N | 0.4808 | ambiguous | 0.5447 | ambiguous | -0.585 | Destabilizing | 0.953 | D | 0.532 | neutral | None | None | None | None | I |
S/P | 0.981 | likely_pathogenic | 0.9851 | pathogenic | -0.393 | Destabilizing | 0.991 | D | 0.689 | prob.neutral | N | 0.482231338 | None | None | I |
S/Q | 0.8682 | likely_pathogenic | 0.8873 | pathogenic | -0.78 | Destabilizing | 0.993 | D | 0.649 | neutral | None | None | None | None | I |
S/R | 0.9783 | likely_pathogenic | 0.9829 | pathogenic | -0.554 | Destabilizing | 0.986 | D | 0.692 | prob.neutral | None | None | None | None | I |
S/T | 0.2008 | likely_benign | 0.2498 | benign | -0.666 | Destabilizing | 0.17 | N | 0.28 | neutral | N | 0.471053001 | None | None | I |
S/V | 0.5404 | ambiguous | 0.6283 | pathogenic | -0.393 | Destabilizing | 0.973 | D | 0.609 | neutral | None | None | None | None | I |
S/W | 0.8589 | likely_pathogenic | 0.8846 | pathogenic | -0.921 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | None | None | None | None | I |
S/Y | 0.7095 | likely_pathogenic | 0.7537 | pathogenic | -0.684 | Destabilizing | 0.997 | D | 0.687 | prob.neutral | N | 0.508803313 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.