Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20914 | 62965;62966;62967 | chr2:178588985;178588984;178588983 | chr2:179453712;179453711;179453710 |
N2AB | 19273 | 58042;58043;58044 | chr2:178588985;178588984;178588983 | chr2:179453712;179453711;179453710 |
N2A | 18346 | 55261;55262;55263 | chr2:178588985;178588984;178588983 | chr2:179453712;179453711;179453710 |
N2B | 11849 | 35770;35771;35772 | chr2:178588985;178588984;178588983 | chr2:179453712;179453711;179453710 |
Novex-1 | 11974 | 36145;36146;36147 | chr2:178588985;178588984;178588983 | chr2:179453712;179453711;179453710 |
Novex-2 | 12041 | 36346;36347;36348 | chr2:178588985;178588984;178588983 | chr2:179453712;179453711;179453710 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/S | rs1456081196 | -1.543 | 0.908 | N | 0.745 | 0.298 | 0.648932385495 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Y/S | rs1456081196 | -1.543 | 0.908 | N | 0.745 | 0.298 | 0.648932385495 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Y/S | rs1456081196 | -1.543 | 0.908 | N | 0.745 | 0.298 | 0.648932385495 | gnomAD-4.0.0 | 2.56736E-06 | None | None | None | None | I | None | 1.69136E-05 | 0 | None | 0 | 2.44236E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5802 | likely_pathogenic | 0.5758 | pathogenic | -1.651 | Destabilizing | 0.648 | D | 0.655 | neutral | None | None | None | None | I |
Y/C | 0.1422 | likely_benign | 0.1457 | benign | -0.712 | Destabilizing | 0.991 | D | 0.747 | deleterious | N | 0.393344366 | None | None | I |
Y/D | 0.7888 | likely_pathogenic | 0.8036 | pathogenic | 0.255 | Stabilizing | 0.968 | D | 0.777 | deleterious | N | 0.475074741 | None | None | I |
Y/E | 0.9126 | likely_pathogenic | 0.9145 | pathogenic | 0.324 | Stabilizing | 0.929 | D | 0.751 | deleterious | None | None | None | None | I |
Y/F | 0.0658 | likely_benign | 0.058 | benign | -0.593 | Destabilizing | 0.004 | N | 0.375 | neutral | N | 0.415333004 | None | None | I |
Y/G | 0.7691 | likely_pathogenic | 0.7738 | pathogenic | -1.946 | Destabilizing | 0.929 | D | 0.756 | deleterious | None | None | None | None | I |
Y/H | 0.2919 | likely_benign | 0.2953 | benign | -0.497 | Destabilizing | 0.908 | D | 0.691 | prob.neutral | N | 0.416162511 | None | None | I |
Y/I | 0.4179 | ambiguous | 0.3865 | ambiguous | -0.797 | Destabilizing | 0.764 | D | 0.711 | prob.delet. | None | None | None | None | I |
Y/K | 0.9265 | likely_pathogenic | 0.9266 | pathogenic | -0.696 | Destabilizing | 0.929 | D | 0.755 | deleterious | None | None | None | None | I |
Y/L | 0.5596 | ambiguous | 0.5664 | pathogenic | -0.797 | Destabilizing | 0.48 | N | 0.523 | neutral | None | None | None | None | I |
Y/M | 0.6748 | likely_pathogenic | 0.6572 | pathogenic | -0.64 | Destabilizing | 0.98 | D | 0.775 | deleterious | None | None | None | None | I |
Y/N | 0.4968 | ambiguous | 0.5056 | ambiguous | -0.998 | Destabilizing | 0.968 | D | 0.766 | deleterious | N | 0.486291812 | None | None | I |
Y/P | 0.9601 | likely_pathogenic | 0.9616 | pathogenic | -1.071 | Destabilizing | 0.976 | D | 0.776 | deleterious | None | None | None | None | I |
Y/Q | 0.7848 | likely_pathogenic | 0.7754 | pathogenic | -0.863 | Destabilizing | 0.976 | D | 0.787 | deleterious | None | None | None | None | I |
Y/R | 0.8329 | likely_pathogenic | 0.8308 | pathogenic | -0.398 | Destabilizing | 0.929 | D | 0.766 | deleterious | None | None | None | None | I |
Y/S | 0.3775 | ambiguous | 0.3829 | ambiguous | -1.59 | Destabilizing | 0.908 | D | 0.745 | deleterious | N | 0.442231604 | None | None | I |
Y/T | 0.5931 | likely_pathogenic | 0.5834 | pathogenic | -1.421 | Destabilizing | 0.929 | D | 0.751 | deleterious | None | None | None | None | I |
Y/V | 0.2976 | likely_benign | 0.2785 | benign | -1.071 | Destabilizing | 0.48 | N | 0.661 | neutral | None | None | None | None | I |
Y/W | 0.3708 | ambiguous | 0.3902 | ambiguous | -0.34 | Destabilizing | 0.98 | D | 0.685 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.