Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20917 | 62974;62975;62976 | chr2:178588976;178588975;178588974 | chr2:179453703;179453702;179453701 |
N2AB | 19276 | 58051;58052;58053 | chr2:178588976;178588975;178588974 | chr2:179453703;179453702;179453701 |
N2A | 18349 | 55270;55271;55272 | chr2:178588976;178588975;178588974 | chr2:179453703;179453702;179453701 |
N2B | 11852 | 35779;35780;35781 | chr2:178588976;178588975;178588974 | chr2:179453703;179453702;179453701 |
Novex-1 | 11977 | 36154;36155;36156 | chr2:178588976;178588975;178588974 | chr2:179453703;179453702;179453701 |
Novex-2 | 12044 | 36355;36356;36357 | chr2:178588976;178588975;178588974 | chr2:179453703;179453702;179453701 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1052813873 | None | None | N | 0.087 | 0.047 | 0.141422826196 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs1052813873 | None | None | N | 0.087 | 0.047 | 0.141422826196 | gnomAD-4.0.0 | 2.03009E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.20501E-06 | 4.69704E-05 | 0 |
T/S | None | None | None | N | 0.091 | 0.049 | 0.0611884634855 | gnomAD-4.0.0 | 1.36973E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79955E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0552 | likely_benign | 0.0569 | benign | -0.33 | Destabilizing | None | N | 0.087 | neutral | N | 0.405849516 | None | None | N |
T/C | 0.2903 | likely_benign | 0.295 | benign | -0.216 | Destabilizing | 0.356 | N | 0.307 | neutral | None | None | None | None | N |
T/D | 0.3659 | ambiguous | 0.3742 | ambiguous | 0.205 | Stabilizing | 0.016 | N | 0.255 | neutral | None | None | None | None | N |
T/E | 0.3931 | ambiguous | 0.3898 | ambiguous | 0.122 | Stabilizing | 0.016 | N | 0.257 | neutral | None | None | None | None | N |
T/F | 0.2699 | likely_benign | 0.277 | benign | -0.862 | Destabilizing | 0.356 | N | 0.309 | neutral | None | None | None | None | N |
T/G | 0.142 | likely_benign | 0.147 | benign | -0.445 | Destabilizing | 0.016 | N | 0.252 | neutral | None | None | None | None | N |
T/H | 0.243 | likely_benign | 0.2576 | benign | -0.733 | Destabilizing | 0.214 | N | 0.288 | neutral | None | None | None | None | N |
T/I | 0.2204 | likely_benign | 0.2211 | benign | -0.151 | Destabilizing | 0.055 | N | 0.353 | neutral | N | 0.471882507 | None | None | N |
T/K | 0.3237 | likely_benign | 0.3276 | benign | -0.289 | Destabilizing | 0.016 | N | 0.259 | neutral | None | None | None | None | N |
T/L | 0.113 | likely_benign | 0.1185 | benign | -0.151 | Destabilizing | 0.016 | N | 0.261 | neutral | None | None | None | None | N |
T/M | 0.0967 | likely_benign | 0.0976 | benign | 0.051 | Stabilizing | 0.628 | D | 0.317 | neutral | None | None | None | None | N |
T/N | 0.0852 | likely_benign | 0.0898 | benign | -0.065 | Destabilizing | None | N | 0.083 | neutral | N | 0.426475505 | None | None | N |
T/P | 0.2953 | likely_benign | 0.2734 | benign | -0.183 | Destabilizing | 0.106 | N | 0.356 | neutral | N | 0.467548549 | None | None | N |
T/Q | 0.2527 | likely_benign | 0.2619 | benign | -0.31 | Destabilizing | 0.072 | N | 0.349 | neutral | None | None | None | None | N |
T/R | 0.286 | likely_benign | 0.2856 | benign | -0.012 | Destabilizing | 0.072 | N | 0.314 | neutral | None | None | None | None | N |
T/S | 0.0746 | likely_benign | 0.0749 | benign | -0.283 | Destabilizing | None | N | 0.091 | neutral | N | 0.391648068 | None | None | N |
T/V | 0.142 | likely_benign | 0.1443 | benign | -0.183 | Destabilizing | 0.016 | N | 0.171 | neutral | None | None | None | None | N |
T/W | 0.6352 | likely_pathogenic | 0.6444 | pathogenic | -0.867 | Destabilizing | 0.864 | D | 0.31 | neutral | None | None | None | None | N |
T/Y | 0.2651 | likely_benign | 0.2914 | benign | -0.577 | Destabilizing | 0.628 | D | 0.303 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.