Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 20919 | 62980;62981;62982 | chr2:178588970;178588969;178588968 | chr2:179453697;179453696;179453695 |
N2AB | 19278 | 58057;58058;58059 | chr2:178588970;178588969;178588968 | chr2:179453697;179453696;179453695 |
N2A | 18351 | 55276;55277;55278 | chr2:178588970;178588969;178588968 | chr2:179453697;179453696;179453695 |
N2B | 11854 | 35785;35786;35787 | chr2:178588970;178588969;178588968 | chr2:179453697;179453696;179453695 |
Novex-1 | 11979 | 36160;36161;36162 | chr2:178588970;178588969;178588968 | chr2:179453697;179453696;179453695 |
Novex-2 | 12046 | 36361;36362;36363 | chr2:178588970;178588969;178588968 | chr2:179453697;179453696;179453695 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs756059826 | -0.385 | 0.966 | N | 0.399 | 0.32 | 0.713529394019 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
L/S | rs756059826 | -0.385 | 0.966 | N | 0.399 | 0.32 | 0.713529394019 | gnomAD-4.0.0 | 1.59424E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86107E-06 | 0 | 0 |
L/W | None | None | 0.028 | N | 0.359 | 0.176 | 0.670941187113 | gnomAD-4.0.0 | 1.59424E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86107E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.211 | likely_benign | 0.1747 | benign | -0.689 | Destabilizing | 0.842 | D | 0.412 | neutral | None | None | None | None | N |
L/C | 0.5201 | ambiguous | 0.4581 | ambiguous | -0.657 | Destabilizing | 0.998 | D | 0.437 | neutral | None | None | None | None | N |
L/D | 0.6945 | likely_pathogenic | 0.6028 | pathogenic | -0.061 | Destabilizing | 0.991 | D | 0.413 | neutral | None | None | None | None | N |
L/E | 0.3886 | ambiguous | 0.3049 | benign | -0.142 | Destabilizing | 0.991 | D | 0.413 | neutral | None | None | None | None | N |
L/F | 0.1691 | likely_benign | 0.141 | benign | -0.629 | Destabilizing | 0.934 | D | 0.42 | neutral | N | 0.443829114 | None | None | N |
L/G | 0.4715 | ambiguous | 0.4088 | ambiguous | -0.868 | Destabilizing | 0.974 | D | 0.381 | neutral | None | None | None | None | N |
L/H | 0.2784 | likely_benign | 0.226 | benign | -0.135 | Destabilizing | 0.998 | D | 0.405 | neutral | None | None | None | None | N |
L/I | 0.0808 | likely_benign | 0.0727 | benign | -0.337 | Destabilizing | 0.016 | N | 0.168 | neutral | None | None | None | None | N |
L/K | 0.27 | likely_benign | 0.2164 | benign | -0.371 | Destabilizing | 0.974 | D | 0.419 | neutral | None | None | None | None | N |
L/M | 0.0988 | likely_benign | 0.0899 | benign | -0.388 | Destabilizing | 0.934 | D | 0.487 | neutral | N | 0.448677574 | None | None | N |
L/N | 0.3358 | likely_benign | 0.2704 | benign | -0.188 | Destabilizing | 0.991 | D | 0.411 | neutral | None | None | None | None | N |
L/P | 0.2204 | likely_benign | 0.1873 | benign | -0.421 | Destabilizing | 0.991 | D | 0.409 | neutral | None | None | None | None | N |
L/Q | 0.1575 | likely_benign | 0.1269 | benign | -0.393 | Destabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | N |
L/R | 0.2385 | likely_benign | 0.2002 | benign | 0.165 | Stabilizing | 0.991 | D | 0.423 | neutral | None | None | None | None | N |
L/S | 0.2727 | likely_benign | 0.2174 | benign | -0.682 | Destabilizing | 0.966 | D | 0.399 | neutral | N | 0.393205506 | None | None | N |
L/T | 0.1797 | likely_benign | 0.1464 | benign | -0.651 | Destabilizing | 0.842 | D | 0.437 | neutral | None | None | None | None | N |
L/V | 0.0827 | likely_benign | 0.075 | benign | -0.421 | Destabilizing | 0.022 | N | 0.132 | neutral | N | 0.383991377 | None | None | N |
L/W | 0.3791 | ambiguous | 0.3262 | benign | -0.642 | Destabilizing | 0.028 | N | 0.359 | neutral | N | 0.492217707 | None | None | N |
L/Y | 0.415 | ambiguous | 0.3633 | ambiguous | -0.395 | Destabilizing | 0.949 | D | 0.434 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.